The 2.0 version of rSNPBase

Variant report

Variant rs60701356
Chromosome Location chr20:1325617-1325618
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:65 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr20:1307600-1327200 Weak transcription Fetal Brain Female brain
2 chr20:1307600-1340400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
3 chr20:1309800-1335400 Weak transcription Rectal Smooth Muscle rectum
4 chr20:1310000-1348800 Weak transcription Placenta Amnion Placenta Amnion
5 chr20:1311600-1335200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
6 chr20:1313800-1327200 Weak transcription HUES6 Cell Line embryonic stem cell
7 chr20:1314600-1327200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
8 chr20:1314800-1327200 Weak transcription Primary T regulatory cells fromperipheralblood blood
9 chr20:1315000-1327600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr20:1315600-1329200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
11 chr20:1316200-1327200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
12 chr20:1317600-1325800 Weak transcription Dnd41 blood
13 chr20:1317600-1333800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
14 chr20:1317800-1325800 Weak transcription Primary T helper naive cells from peripheral blood blood
15 chr20:1317800-1326000 Weak transcription GM12878-XiMat blood
16 chr20:1317800-1326600 Weak transcription Primary hematopoietic stem cells short term culture blood
17 chr20:1317800-1335400 Weak transcription Brain Anterior Caudate brain
18 chr20:1318000-1327000 Weak transcription Primary B cells from cord blood blood
19 chr20:1318000-1328000 Weak transcription Primary hematopoietic stem cells blood
20 chr20:1318000-1331600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
21 chr20:1318000-1335000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
22 chr20:1318000-1335000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
23 chr20:1318400-1325800 Weak transcription Primary T killer naive cells fromperipheralblood blood
24 chr20:1318400-1335000 Weak transcription Rectal Mucosa Donor 31 rectum
25 chr20:1318400-1335000 Weak transcription NHEK skin
26 chr20:1318400-1335200 Weak transcription Rectal Mucosa Donor 29 rectum
27 chr20:1318800-1325800 Weak transcription Primary T helper naive cells fromperipheralblood blood
28 chr20:1318800-1327200 Weak transcription HepG2 liver
29 chr20:1318800-1335000 Weak transcription Gastric stomach
30 chr20:1319200-1335000 Weak transcription Duodenum Mucosa Duodenum
31 chr20:1319600-1335000 Weak transcription Placenta Placenta
32 chr20:1319800-1335000 Weak transcription Right Ventricle heart
33 chr20:1321600-1340400 Weak transcription K562 blood
34 chr20:1322000-1326000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
35 chr20:1322000-1326200 Enhancers HUVEC blood vessel
36 chr20:1322400-1335000 Weak transcription Lung lung
37 chr20:1322800-1335000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
38 chr20:1323000-1335000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
39 chr20:1323000-1335000 Weak transcription Ovary ovary
40 chr20:1323000-1350600 Weak transcription Fetal Brain Male brain
41 chr20:1323200-1326000 Weak transcription Primary T cells from cord blood blood
42 chr20:1323200-1335200 Weak transcription Brain Angular Gyrus brain
43 chr20:1323200-1335200 Weak transcription NHLF lung
44 chr20:1323200-1335800 Weak transcription HSMMtube muscle
45 chr20:1323400-1325800 Weak transcription Thymus Thymus
46 chr20:1323400-1335000 Weak transcription Pancreas Pancrea
47 chr20:1323400-1335400 Weak transcription Spleen Spleen
48 chr20:1323400-1354000 Weak transcription Fetal Heart heart
49 chr20:1323600-1326000 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
50 chr20:1323600-1335000 Weak transcription Skeletal Muscle Male skeletal muscle

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Last update: Aug 31, 2015