The 2.0 version of rSNPBase
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Variant report
Variant
rs60719930
Chromosome Location
chr4:118790829-118790830
allele
A/G
Outlinks
Ensembl
 
UCSC
Chromatin state
Related regulatory elements
Target genes
Other information
TF binding region (count:0)
CpG islands (count:0)
Chromatin interactive region (count:0)
LncRNA region (count:2)
Mature miRNA region (count: 0)
miRNA target sites (count:0)
No data
No data
No data
(count:2 , 50 per page) page:
1
No.
lncRNA name
Chromosome Location
lncRNA alias
1
lnc-NDST3-2
chr4:118790614-118791079
XLOC_003660
2
lnc-NDST3-2
chr4:118790614-118791103
XLOC_003660
No data
No data
No data
Extended variants information (count: 6 )
Associated traits (count: 0)
rSNPs within LD-proxies of this variant (count:6)
rs_ID
r
2
[population]
rs4296744
0.80[EUR][1000 genomes]
rs4580717
0.81[EUR][1000 genomes]
rs55775462
0.81[EUR][1000 genomes]
rs58175672
0.87[AFR][1000 genomes]
rs59706062
0.84[AFR][1000 genomes]
rs61101407
0.94[AFR][1000 genomes]
No data
Chromatin state (count:0 , 50 per page) page:
No data
Quick Search:
Input of quick search could be:
dbSNP/dbVar ID:
rs12345
/
nsv7879
a single nucleotide as 0-based coordinates:
chr1:12345
chromosomal regions:
chr1:12345-34567
what's new
New variant types
New dimension of annotation
New regulatory manner
More detailed annotation on variant overlapped TFBS
More extended data
New search manner
Quick links