The 2.0 version of rSNPBase

Variant report

Variant rs60733415
Chromosome Location chr6:144826759-144826760
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:98 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:144764400-144838800 Weak transcription A549 lung
2 chr6:144795800-144849800 Weak transcription HMEC breast
3 chr6:144800000-144829600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
4 chr6:144803200-144826800 Weak transcription Fetal Brain Male brain
5 chr6:144803400-144869800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
6 chr6:144807200-144828800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
7 chr6:144807400-144904000 Weak transcription Brain Substantia Nigra brain
8 chr6:144812400-144835000 Weak transcription Primary T killer memory cells from peripheral blood blood
9 chr6:144812400-144840400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
10 chr6:144812400-144844800 Weak transcription Placenta Amnion Placenta Amnion
11 chr6:144812400-144881000 Weak transcription Stomach Mucosa stomach
12 chr6:144812600-144849600 Weak transcription Cortex derived primary cultured neurospheres brain
13 chr6:144812600-144849600 Weak transcription NH-A brain
14 chr6:144812600-144869800 Weak transcription Colon Smooth Muscle Colon
15 chr6:144813400-144850000 Weak transcription Colonic Mucosa Colon
16 chr6:144813600-144828800 Weak transcription Right Ventricle heart
17 chr6:144813600-144834800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
18 chr6:144814800-144834000 Weak transcription NHLF lung
19 chr6:144815000-144836200 Weak transcription H1 Cell Line embryonic stem cell
20 chr6:144815000-144855400 Weak transcription Psoas Muscle Psoas
21 chr6:144815200-144835000 Weak transcription iPS-18 Cell Line embryonic stem cell
22 chr6:144815200-144881000 Weak transcription NHEK skin
23 chr6:144815400-144828600 Weak transcription Ovary ovary
24 chr6:144816600-144829200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
25 chr6:144816600-144881400 Strong transcription Primary Natural Killer cells fromperipheralblood blood
26 chr6:144820200-144828600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
27 chr6:144820600-144835000 Weak transcription Placenta Placenta
28 chr6:144821000-144828600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
29 chr6:144821000-144828600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
30 chr6:144821000-144828600 Weak transcription Fetal Stomach stomach
31 chr6:144821000-144834600 Weak transcription Osteobl bone
32 chr6:144821000-144835200 Weak transcription Rectal Mucosa Donor 31 rectum
33 chr6:144821000-144844200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
34 chr6:144821200-144827200 Weak transcription Skeletal Muscle Female skeletal muscle
35 chr6:144821200-144828400 Weak transcription Thymus Thymus
36 chr6:144821200-144828600 Weak transcription Fetal Thymus thymus
37 chr6:144821200-144828600 Weak transcription Lung lung
38 chr6:144821200-144828600 Weak transcription Sigmoid Colon Sigmoid Colon
39 chr6:144821200-144828800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
40 chr6:144821200-144828800 Weak transcription Esophagus oesophagus
41 chr6:144821200-144828800 Weak transcription Fetal Intestine Large intestine
42 chr6:144821200-144828800 Weak transcription Skeletal Muscle Male skeletal muscle
43 chr6:144821200-144828800 Weak transcription Spleen Spleen
44 chr6:144821200-144829000 Weak transcription Rectal Mucosa Donor 29 rectum
45 chr6:144821200-144835800 Weak transcription Pancreas Pancrea
46 chr6:144821200-144836400 Weak transcription GM12878-XiMat blood
47 chr6:144821200-144837200 Weak transcription Stomach Smooth Muscle stomach
48 chr6:144821200-144838000 Weak transcription Muscle Satellite Cultured Cells --
49 chr6:144821200-144850000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
50 chr6:144821200-144861000 Weak transcription Rectal Smooth Muscle rectum

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Last update: Aug 31, 2015