Variant report

Variant	rs60744456
Chromosome Location	chr2:212488171-212488172
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs56167621	1.00[AMR][1000 genomes]
rs73988623	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73988624	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73988625	1.00[AMR][1000 genomes]
rs73988627	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73988630	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73988631	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv584321	chr2:212446818-212511895	Enhancers Active TSS Weak transcription Genic enhancers Flanking Active TSS ZNF genes & repeats Strong transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
2	esv2754366	chr2:212470494-212541494	Weak transcription Enhancers Active TSS ZNF genes & repeats Strong transcription Genic enhancers Flanking Active TSS	TF binding region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:212467400-212546800	Weak transcription	Aorta	Aorta
2	chr2:212470400-212489600	Weak transcription	Fetal Heart	heart
3	chr2:212484200-212488400	Weak transcription	HUVEC	blood vessel
4	chr2:212487800-212488400	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
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chromosomal regions: chr1:12345-34567

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