Variant report

Variant	rs60764532
Chromosome Location	chr14:64463065-64463066
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr14:64457255..64458823-chr14:64462869..64464742,2	K562	blood:

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:4)

rs_ID	r²[population]
rs34001379	1.00[AFR][1000 genomes]
rs35883188	0.93[AFR][1000 genomes]
rs59252260	1.00[AFR][1000 genomes]
rs61115466	0.86[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv915909	chr14:63620440-64560369	Active TSS Genic enhancers Weak transcription Enhancers Flanking Active TSS Strong transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	67 gene(s)	inside rSNPs	diseases
2	nsv1038825	chr14:64109441-64491720	Enhancers Flanking Active TSS Weak transcription Strong transcription Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	34 gene(s)	inside rSNPs	diseases
3	nsv902019	chr14:64395569-64882380	Enhancers Strong transcription Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Active TSS Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	48 gene(s)	inside rSNPs	diseases
4	nsv456326	chr14:64420413-64754361	Strong transcription Weak transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	6 gene(s)	inside rSNPs	diseases
5	nsv564905	chr14:64420413-64754361	Enhancers Strong transcription Weak transcription ZNF genes & repeats Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	6 gene(s)	inside rSNPs	diseases
6	nsv902020	chr14:64434288-64506541	Weak transcription Strong transcription Genic enhancers Enhancers ZNF genes & repeats Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:99 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:64395000-64491000	Weak transcription	Psoas Muscle	Psoas
2	chr14:64417000-64466000	Weak transcription	Colon Smooth Muscle	Colon
3	chr14:64417400-64466200	Weak transcription	Right Ventricle	heart
4	chr14:64419200-64489000	Weak transcription	Small Intestine	intestine
5	chr14:64421600-64466000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
6	chr14:64431200-64463800	Weak transcription	H1 Cell Line	embryonic stem cell
7	chr14:64431200-64464800	Weak transcription	Stomach Mucosa	stomach
8	chr14:64433400-64465800	Weak transcription	Fetal Heart	heart
9	chr14:64435200-64471800	Weak transcription	Hela-S3	cervix
10	chr14:64435400-64463600	Weak transcription	HUES6 Cell Line	embryonic stem cell
11	chr14:64439200-64465600	Weak transcription	Rectal Smooth Muscle	rectum
12	chr14:64439800-64467800	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
13	chr14:64440800-64466000	Weak transcription	Primary B cells from peripheral blood	blood
14	chr14:64440800-64480400	Strong transcription	Primary T cells fromperipheralblood	blood
15	chr14:64441600-64467600	Weak transcription	Placenta Amnion	Placenta Amnion
16	chr14:64442400-64491000	Weak transcription	H9 Cell Line	embryonic stem cell
17	chr14:64445800-64463800	Weak transcription	Primary T killer memory cells from peripheral blood	blood
18	chr14:64449200-64466200	Weak transcription	Spleen	Spleen
19	chr14:64450000-64465800	Weak transcription	Stomach Smooth Muscle	stomach
20	chr14:64452400-64480600	Strong transcription	Primary T helper cells fromperipheralblood	blood
21	chr14:64452600-64479200	Strong transcription	Primary T regulatory cells fromperipheralblood	blood
22	chr14:64456600-64468200	Weak transcription	Pancreatic Islets	Pancreatic Islet
23	chr14:64456800-64466000	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
24	chr14:64457000-64470600	Strong transcription	Primary T helper memory cells from peripheral blood 1	blood
25	chr14:64457000-64474600	Strong transcription	Primary T helper cells PMA-I stimulated	--
26	chr14:64457000-64480000	Strong transcription	Dnd41	blood
27	chr14:64457000-64502000	Strong transcription	Placenta	Placenta
28	chr14:64457000-64519200	Weak transcription	iPS-15b Cell Line	embryonic stem cell
29	chr14:64457200-64465600	Strong transcription	Thymus	Thymus
30	chr14:64457200-64470600	Strong transcription	HUES64 Cell Line	embryonic stem cell
31	chr14:64457200-64476000	Strong transcription	Fetal Brain Female	brain
32	chr14:64457200-64480200	Strong transcription	Primary neutrophils fromperipheralblood	blood
33	chr14:64457600-64467800	Strong transcription	Duodenum Mucosa	Duodenum
34	chr14:64458200-64463600	Weak transcription	HUES48 Cell Line	embryonic stem cell
35	chr14:64458200-64464400	Weak transcription	Fetal Thymus	thymus
36	chr14:64458200-64468000	Strong transcription	Sigmoid Colon	Sigmoid Colon
37	chr14:64458800-64463600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
38	chr14:64458800-64463600	Weak transcription	Duodenum Smooth Muscle	Duodenum
39	chr14:64458800-64490400	Weak transcription	Colonic Mucosa	Colon
40	chr14:64459000-64463600	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
41	chr14:64459000-64468400	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
42	chr14:64459400-64467400	Strong transcription	Primary T helper naive cells from peripheral blood	blood
43	chr14:64459600-64463600	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
44	chr14:64459600-64471000	Weak transcription	Esophagus	oesophagus
45	chr14:64459600-64478800	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
46	chr14:64459600-64481200	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
47	chr14:64460000-64463400	Weak transcription	Fetal Intestine Small	intestine
48	chr14:64460000-64481200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
49	chr14:64460000-64488000	Weak transcription	Pancreas	Pancrea
50	chr14:64460000-64513400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived

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