The 2.0 version of rSNPBase

Variant report

Variant rs60767324
Chromosome Location chr7:50732659-50732660
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:112 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:50701000-50733600 Weak transcription A549 lung
2 chr7:50701200-50733600 Weak transcription K562 blood
3 chr7:50706400-50744000 Weak transcription Pancreatic Islets Pancreatic Islet
4 chr7:50707200-50748600 Weak transcription ES-I3 Cell Line embryonic stem cell
5 chr7:50710000-50733200 Weak transcription iPS-15b Cell Line embryonic stem cell
6 chr7:50710000-50743600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
7 chr7:50710000-50758200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
8 chr7:50715600-50740600 Weak transcription Brain Germinal Matrix brain
9 chr7:50716600-50740200 Weak transcription Fetal Intestine Large intestine
10 chr7:50720600-50739400 Enhancers Right Atrium heart
11 chr7:50722000-50737600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr7:50723600-50735200 Strong transcription Cortex derived primary cultured neurospheres brain
13 chr7:50724200-50742800 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
14 chr7:50725400-50737600 Enhancers Psoas Muscle Psoas
15 chr7:50726000-50734200 Weak transcription Fetal Heart heart
16 chr7:50726000-50734600 Strong transcription Fetal Stomach stomach
17 chr7:50726000-50741000 Weak transcription Fetal Brain Female brain
18 chr7:50726600-50733600 Weak transcription Colon Smooth Muscle Colon
19 chr7:50726600-50734800 Weak transcription Fetal Lung lung
20 chr7:50727200-50734600 Genic enhancers Pancreas Pancrea
21 chr7:50727400-50734600 Strong transcription Fetal Intestine Small intestine
22 chr7:50727600-50733600 Enhancers Primary hematopoietic stem cells blood
23 chr7:50727800-50737400 Weak transcription H9 Cell Line embryonic stem cell
24 chr7:50728400-50737600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
25 chr7:50728600-50733000 Enhancers Primary hematopoietic stem cells short term culture blood
26 chr7:50728600-50733200 Enhancers Primary T helper cells PMA-I stimulated --
27 chr7:50728600-50733400 Enhancers Primary T helper 17 cells PMA-I stimulated --
28 chr7:50728800-50735400 Weak transcription Colonic Mucosa Colon
29 chr7:50729200-50737600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
30 chr7:50729400-50733400 Enhancers Brain Anterior Caudate brain
31 chr7:50729400-50734400 Genic enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
32 chr7:50729800-50736000 Enhancers Brain Hippocampus Middle brain
33 chr7:50729800-50741600 Weak transcription Rectal Mucosa Donor 29 rectum
34 chr7:50730000-50733000 Enhancers Primary T regulatory cells fromperipheralblood blood
35 chr7:50730000-50733600 Weak transcription Fetal Muscle Trunk muscle
36 chr7:50730000-50734200 Genic enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
37 chr7:50730000-50736600 Enhancers Breast Myoepithelial Primary Cells Breast
38 chr7:50730000-50737200 Enhancers Left Ventricle heart
39 chr7:50730200-50734000 Weak transcription Duodenum Smooth Muscle Duodenum
40 chr7:50730200-50744000 Weak transcription Small Intestine intestine
41 chr7:50730200-50748600 Weak transcription Rectal Mucosa Donor 31 rectum
42 chr7:50730400-50733200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
43 chr7:50730400-50733200 Enhancers Primary T helper memory cells from peripheral blood 1 blood
44 chr7:50730400-50733400 Weak transcription Fetal Muscle Leg muscle
45 chr7:50730400-50738600 Weak transcription Sigmoid Colon Sigmoid Colon
46 chr7:50730600-50733000 Enhancers Primary T helper naive cells from peripheral blood blood
47 chr7:50730600-50733000 Enhancers Primary T killer memory cells from peripheral blood blood
48 chr7:50730600-50733200 Enhancers Right Ventricle heart
49 chr7:50730600-50733600 Enhancers Brain Substantia Nigra brain
50 chr7:50730800-50733400 Bivalent Enhancer Primary T cells fromperipheralblood blood

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Last update: Aug 31, 2015