The 2.0 version of rSNPBase

Variant report

Variant rs60783713
Chromosome Location chr3:160785043-160785044
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:44 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:160768000-160786400 Weak transcription Left Ventricle heart
2 chr3:160773200-160786800 Weak transcription Primary hematopoietic stem cells blood
3 chr3:160773600-160785600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
4 chr3:160773800-160787200 Weak transcription Gastric stomach
5 chr3:160776000-160787200 Weak transcription Brain Angular Gyrus brain
6 chr3:160777200-160787800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
7 chr3:160778200-160786400 Weak transcription Skeletal Muscle Male skeletal muscle
8 chr3:160779200-160785200 Weak transcription Aorta Aorta
9 chr3:160780400-160788600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
10 chr3:160780600-160786400 Weak transcription Primary T cells from cord blood blood
11 chr3:160780800-160821400 Weak transcription Fetal Brain Male brain
12 chr3:160781200-160786600 Weak transcription Monocytes-CD14+_RO01746 blood
13 chr3:160781400-160785400 Weak transcription Pancreas Pancrea
14 chr3:160781400-160803400 Weak transcription Fetal Muscle Trunk muscle
15 chr3:160781600-160788000 Weak transcription Psoas Muscle Psoas
16 chr3:160781600-160791000 Weak transcription Colon Smooth Muscle Colon
17 chr3:160781800-160787200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
18 chr3:160781800-160787400 Weak transcription Fetal Muscle Leg muscle
19 chr3:160781800-160798200 Weak transcription Fetal Stomach stomach
20 chr3:160781800-160822000 Weak transcription Thymus Thymus
21 chr3:160782000-160799800 Weak transcription Duodenum Smooth Muscle Duodenum
22 chr3:160782200-160785200 Weak transcription Adipose Nuclei Adipose
23 chr3:160782600-160785600 Strong transcription Skeletal Muscle Female skeletal muscle
24 chr3:160782600-160786400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
25 chr3:160782600-160787200 Weak transcription Brain Cingulate Gyrus brain
26 chr3:160782800-160795000 Weak transcription Right Ventricle heart
27 chr3:160783200-160787200 Weak transcription Fetal Intestine Small intestine
28 chr3:160783400-160787200 Weak transcription Fetal Thymus thymus
29 chr3:160783400-160787400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
30 chr3:160783400-160787400 Weak transcription Brain Hippocampus Middle brain
31 chr3:160783400-160788600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
32 chr3:160783800-160787200 Weak transcription Fetal Brain Female brain
33 chr3:160784000-160785400 Weak transcription Stomach Smooth Muscle stomach
34 chr3:160784000-160787000 Weak transcription Brain Germinal Matrix brain
35 chr3:160784000-160787200 Weak transcription Esophagus oesophagus
36 chr3:160784000-160789400 Weak transcription Rectal Smooth Muscle rectum
37 chr3:160784200-160787200 Enhancers Primary B cells from cord blood blood
38 chr3:160784200-160799000 Weak transcription Ovary ovary
39 chr3:160784400-160788800 Enhancers Primary B cells from peripheral blood blood
40 chr3:160784600-160785400 Flanking Active TSS Primary neutrophils fromperipheralblood blood
41 chr3:160784600-160786200 Enhancers Pancreatic Islets Pancreatic Islet
42 chr3:160785000-160786800 Enhancers Fetal Heart heart
43 chr3:160785000-160786800 Enhancers GM12878-XiMat blood
44 chr3:160785000-160789000 Weak transcription Primary mononuclear cells fromperipheralblood Blood

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Last update: Aug 31, 2015