Variant report

Variant	rs60813799
Chromosome Location	chr9:73734329-73734330
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs7859140	0.94[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1035505	chr9:73709852-73934353	Weak transcription Enhancers Active TSS Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:21 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:73720400-73735200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
2	chr9:73728000-73736000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
3	chr9:73728400-73734600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
4	chr9:73730800-73736200	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
5	chr9:73731200-73734600	Weak transcription	H9 Cell Line	embryonic stem cell
6	chr9:73731200-73734600	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
7	chr9:73731800-73734600	Enhancers	iPS-15b Cell Line	embryonic stem cell
8	chr9:73732400-73735000	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
9	chr9:73732800-73734400	Enhancers	H1 Cell Line	embryonic stem cell
10	chr9:73732800-73737800	Active TSS	Fetal Brain Female	brain
11	chr9:73733000-73735600	Flanking Active TSS	iPS-18 Cell Line	embryonic stem cell
12	chr9:73733200-73735000	Enhancers	ES-I3 Cell Line	embryonic stem cell
13	chr9:73733400-73735400	Flanking Active TSS	HUES48 Cell Line	embryonic stem cell
14	chr9:73733600-73734600	Weak transcription	HUES6 Cell Line	embryonic stem cell
15	chr9:73733600-73735200	Flanking Active TSS	iPS-20b Cell Line	embryonic stem cell
16	chr9:73733600-73735400	Flanking Active TSS	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
17	chr9:73733800-73734600	Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
18	chr9:73733800-73734800	Weak transcription	Brain Substantia Nigra	brain
19	chr9:73733800-73737000	Active TSS	Fetal Brain Male	brain
20	chr9:73734200-73734400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
21	chr9:73734200-73735600	Flanking Active TSS	HUES64 Cell Line	embryonic stem cell

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