The 2.0 version of rSNPBase

Variant report

Variant rs6083121
Chromosome Location chr20:23396291-23396292
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:98 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr20:23354400-23399800 Weak transcription Hela-S3 cervix
2 chr20:23361200-23399600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
3 chr20:23372800-23400800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
4 chr20:23375600-23396800 Weak transcription Pancreatic Islets Pancreatic Islet
5 chr20:23375600-23400000 Weak transcription Rectal Smooth Muscle rectum
6 chr20:23375800-23400000 Weak transcription H9 Cell Line embryonic stem cell
7 chr20:23375800-23400200 Weak transcription Fetal Brain Male brain
8 chr20:23376600-23400400 Weak transcription Fetal Muscle Trunk muscle
9 chr20:23377000-23398400 Weak transcription Primary hematopoietic stem cells blood
10 chr20:23378200-23400000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
11 chr20:23378400-23399800 Weak transcription iPS-20b Cell Line embryonic stem cell
12 chr20:23378800-23396400 Weak transcription Brain Cingulate Gyrus brain
13 chr20:23378800-23399800 Weak transcription Brain Inferior Temporal Lobe brain
14 chr20:23379000-23400000 Weak transcription Cortex derived primary cultured neurospheres brain
15 chr20:23379000-23400200 Weak transcription Primary B cells from cord blood blood
16 chr20:23379000-23400400 Weak transcription Brain Substantia Nigra brain
17 chr20:23379200-23400000 Weak transcription HUVEC blood vessel
18 chr20:23379200-23400200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
19 chr20:23380800-23400000 Weak transcription NH-A brain
20 chr20:23382000-23400200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
21 chr20:23382200-23398400 Weak transcription Fetal Brain Female brain
22 chr20:23382200-23400200 Weak transcription A549 lung
23 chr20:23382400-23397400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
24 chr20:23383000-23398000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
25 chr20:23383000-23399800 Weak transcription Fetal Intestine Small intestine
26 chr20:23383000-23400400 Weak transcription Thymus Thymus
27 chr20:23383200-23400000 Weak transcription Primary monocytes fromperipheralblood blood
28 chr20:23383600-23396400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
29 chr20:23383600-23400000 Weak transcription Monocytes-CD14+_RO01746 blood
30 chr20:23383600-23400400 Weak transcription Fetal Thymus thymus
31 chr20:23383800-23398600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
32 chr20:23385200-23400400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
33 chr20:23385400-23399000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
34 chr20:23385400-23400400 Weak transcription Aorta Aorta
35 chr20:23385600-23396400 Weak transcription NHEK skin
36 chr20:23385600-23396600 Weak transcription HMEC breast
37 chr20:23385600-23398200 Weak transcription Primary hematopoietic stem cells short term culture blood
38 chr20:23385800-23396400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
39 chr20:23387000-23400400 Weak transcription Sigmoid Colon Sigmoid Colon
40 chr20:23388400-23396400 Weak transcription K562 blood
41 chr20:23388800-23399800 Weak transcription Small Intestine intestine
42 chr20:23389200-23400400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
43 chr20:23389600-23398200 Weak transcription Primary T cells from cord blood blood
44 chr20:23389600-23400200 Weak transcription Primary B cells from peripheral blood blood
45 chr20:23389800-23398400 Weak transcription Primary T killer memory cells from peripheral blood blood
46 chr20:23390000-23396400 Weak transcription Primary T helper cells fromperipheralblood blood
47 chr20:23390600-23398400 Weak transcription Primary T helper cells PMA-I stimulated --
48 chr20:23390600-23398600 Weak transcription Colon Smooth Muscle Colon
49 chr20:23390800-23400400 Weak transcription Lung lung
50 chr20:23391200-23396600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood

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Last update: Aug 31, 2015