Variant report

Variant rs6083736
Chromosome Location chr20:25057820-25057821
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:55 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr20:25046800-25058200 Weak transcription Right Atrium heart
2 chr20:25056800-25058200 Enhancers Breast Myoepithelial Primary Cells Breast
3 chr20:25056800-25058600 Enhancers Gastric stomach
4 chr20:25057200-25058000 Enhancers Hela-S3 cervix
5 chr20:25057200-25058200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
6 chr20:25057200-25058200 Enhancers Liver Liver
7 chr20:25057200-25058200 Enhancers Pancreas Pancrea
8 chr20:25057200-25058200 Enhancers HMEC breast
9 chr20:25057200-25058200 Bivalent Enhancer NHEK skin
10 chr20:25057200-25058400 Flanking Active TSS Skeletal Muscle Female skeletal muscle
11 chr20:25057200-25058800 Bivalent Enhancer Thymus Thymus
12 chr20:25057200-25060600 Enhancers Dnd41 blood
13 chr20:25057400-25058000 Bivalent Enhancer H1 Cell Line embryonic stem cell
14 chr20:25057400-25058000 Bivalent Enhancer HUES6 Cell Line embryonic stem cell
15 chr20:25057400-25058000 Bivalent Enhancer Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
16 chr20:25057400-25058000 Bivalent Enhancer Foreskin Fibroblast Primary Cells skin02 Skin
17 chr20:25057400-25058000 Flanking Active TSS Brain Cingulate Gyrus brain
18 chr20:25057400-25058000 Flanking Active TSS Brain Substantia Nigra brain
19 chr20:25057400-25058000 Bivalent Enhancer Duodenum Smooth Muscle Duodenum
20 chr20:25057400-25058000 Bivalent Enhancer HepG2 liver
21 chr20:25057400-25058200 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
22 chr20:25057400-25058200 Bivalent Enhancer Foreskin Keratinocyte Primary Cells skin02 Skin
23 chr20:25057400-25058200 Bivalent Enhancer Foreskin Keratinocyte Primary Cells skin03 Skin
24 chr20:25057400-25058200 Bivalent Enhancer Left Ventricle heart
25 chr20:25057400-25058200 Flanking Active TSS A549 lung
26 chr20:25057400-25058400 Bivalent Enhancer Muscle Satellite Cultured Cells --
27 chr20:25057400-25058400 Flanking Bivalent TSS/Enh Skeletal Muscle Male skeletal muscle
28 chr20:25057400-25058600 Bivalent Enhancer Primary neutrophils fromperipheralblood blood
29 chr20:25057400-25058800 Enhancers Placenta Placenta
30 chr20:25057600-25058000 Bivalent Enhancer HUES64 Cell Line embryonic stem cell
31 chr20:25057600-25058000 Bivalent Enhancer Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
32 chr20:25057600-25058000 Flanking Active TSS Brain Anterior Caudate brain
33 chr20:25057600-25058000 Weak transcription Esophagus oesophagus
34 chr20:25057600-25058000 Bivalent/Poised TSS Stomach Smooth Muscle stomach
35 chr20:25057600-25058000 Bivalent Enhancer Monocytes-CD14+_RO01746 blood
36 chr20:25057600-25058200 Bivalent Enhancer Foreskin Fibroblast Primary Cells skin01 Skin
37 chr20:25057600-25058200 Bivalent Enhancer Duodenum Mucosa Duodenum
38 chr20:25057600-25058200 Bivalent Enhancer Osteobl bone
39 chr20:25057600-25058400 Bivalent Enhancer Stomach Mucosa stomach
40 chr20:25057600-25058800 Bivalent/Poised TSS ES-I3 Cell Line embryonic stem cell
41 chr20:25057600-25059000 Active TSS Brain Inferior Temporal Lobe brain
42 chr20:25057800-25058000 Bivalent Enhancer iPS-20b Cell Line embryonic stem cell
43 chr20:25057800-25058000 Bivalent Enhancer Rectal Mucosa Donor 31 rectum
44 chr20:25057800-25058000 Bivalent Enhancer GM12878-XiMat blood
45 chr20:25057800-25058200 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
46 chr20:25057800-25058200 Bivalent Enhancer Cortex derived primary cultured neurospheres brain
47 chr20:25057800-25058200 Enhancers Psoas Muscle Psoas
48 chr20:25057800-25058400 Bivalent Enhancer H1 Derived Mesenchymal Stem Cells ES cell derived
49 chr20:25057800-25058400 Bivalent Enhancer Primary monocytes fromperipheralblood blood
50 chr20:25057800-25058400 Flanking Active TSS Brain Hippocampus Middle brain

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