Variant report

Variant	rs60949337
Chromosome Location	chr7:99114684-99114685
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr7:99108990..99112494-chr7:99114125..99117489,4	K562	blood:
2	chr7:99113164..99116014-chr7:99116826..99119364,3	K562	blood:
3	chr7:99109545..99112494-chr7:99114125..99117020,4	K562	blood:

Extended variants
information (count: 2 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs28988594	0.83[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831069	chr7:98948128-99127584	Active TSS Genic enhancers Weak transcription Enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Strong transcription Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	66 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:127 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:99103800-99125600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr7:99104200-99118600	Weak transcription	Right Atrium	heart
3	chr7:99104200-99123000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
4	chr7:99105000-99126000	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
5	chr7:99105000-99126400	Weak transcription	Pancreatic Islets	Pancreatic Islet
6	chr7:99105000-99128000	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
7	chr7:99105000-99128000	Weak transcription	Fetal Heart	heart
8	chr7:99105000-99128800	Weak transcription	Primary T killer memory cells from peripheral blood	blood
9	chr7:99105000-99129400	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
10	chr7:99105400-99115800	Strong transcription	Fetal Intestine Small	intestine
11	chr7:99105400-99125400	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
12	chr7:99105400-99126200	Weak transcription	Stomach Mucosa	stomach
13	chr7:99105600-99124400	Weak transcription	Psoas Muscle	Psoas
14	chr7:99107000-99119600	Strong transcription	Primary mononuclear cells fromperipheralblood	Blood
15	chr7:99107000-99126000	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
16	chr7:99107200-99115400	Strong transcription	Brain Germinal Matrix	brain
17	chr7:99107200-99116000	Strong transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
18	chr7:99107400-99116200	Strong transcription	Placenta	Placenta
19	chr7:99107400-99118400	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
20	chr7:99107400-99118800	Strong transcription	Ganglion Eminence derived primary cultured neurospheres	brain
21	chr7:99107400-99126000	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
22	chr7:99107600-99126000	Strong transcription	Fetal Stomach	stomach
23	chr7:99107800-99118800	Strong transcription	Fetal Muscle Trunk	muscle
24	chr7:99108200-99114800	Strong transcription	Fetal Muscle Leg	muscle
25	chr7:99108200-99118600	Strong transcription	Brain Inferior Temporal Lobe	brain
26	chr7:99108400-99115000	Strong transcription	Primary monocytes fromperipheralblood	blood
27	chr7:99108400-99115400	Strong transcription	Thymus	Thymus
28	chr7:99108400-99115800	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
29	chr7:99108400-99118000	Strong transcription	Primary T cells from cord blood	blood
30	chr7:99108400-99118600	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
31	chr7:99108400-99126000	Strong transcription	Fetal Thymus	thymus
32	chr7:99108600-99114800	Strong transcription	iPS-18 Cell Line	embryonic stem cell
33	chr7:99108600-99114800	Strong transcription	HepG2	liver
34	chr7:99108600-99115000	Strong transcription	Primary B cells from peripheral blood	blood
35	chr7:99108600-99115200	Strong transcription	Rectal Mucosa Donor 29	rectum
36	chr7:99108600-99115200	Strong transcription	Stomach Smooth Muscle	stomach
37	chr7:99108600-99116000	Strong transcription	ES-UCSF4 Cell Line	embryonic stem cell
38	chr7:99108600-99116000	Strong transcription	Primary neutrophils fromperipheralblood	blood
39	chr7:99108600-99116000	Strong transcription	Monocytes-CD14+_RO01746	blood
40	chr7:99108600-99116200	Strong transcription	Primary T regulatory cells fromperipheralblood	blood
41	chr7:99108600-99118400	Strong transcription	Cortex derived primary cultured neurospheres	brain
42	chr7:99108600-99125200	Strong transcription	HUES6 Cell Line	embryonic stem cell
43	chr7:99108600-99126200	Strong transcription	Dnd41	blood
44	chr7:99109200-99116200	Strong transcription	Breast Myoepithelial Primary Cells	Breast
45	chr7:99109600-99114800	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
46	chr7:99109600-99115800	Strong transcription	Primary T helper naive cells fromperipheralblood	blood
47	chr7:99109800-99114800	Strong transcription	NH-A	brain
48	chr7:99110000-99118600	Strong transcription	Duodenum Mucosa	Duodenum
49	chr7:99110000-99121000	Strong transcription	Fetal Intestine Large	intestine
50	chr7:99110400-99122400	Weak transcription	Right Ventricle	heart

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