Variant report

rSNPs within LD-proxies of this variant (count:29)

rs_ID	r²[population]
rs11124577	0.82[ASN][1000 genomes]
rs12468307	0.82[AMR][1000 genomes]
rs12469082	0.85[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs12472984	0.80[AMR][1000 genomes]
rs12476195	0.86[EUR][1000 genomes]
rs17020358	0.86[EUR][1000 genomes]
rs2041839	0.86[EUR][1000 genomes]
rs2075215	0.86[EUR][1000 genomes]
rs2075216	0.86[EUR][1000 genomes]
rs2241163	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2268988	0.92[AMR][1000 genomes];0.95[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs2300883	0.81[AFR][1000 genomes];0.89[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs2300891	0.85[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs2300896	0.86[EUR][1000 genomes]
rs2302649	0.81[ASN][1000 genomes]
rs28384455	1.00[AMR][1000 genomes];0.85[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs3213746	0.86[EUR][1000 genomes]
rs3755191	0.93[AMR][1000 genomes];0.85[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs3755192	0.87[ASN][1000 genomes]
rs4610034	0.95[AFR][1000 genomes];0.98[AMR][1000 genomes];0.83[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4670684	0.81[ASN][1000 genomes]
rs4670685	0.83[ASN][1000 genomes]
rs57861177	0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs59612622	0.81[EUR][1000 genomes]
rs6709930	0.85[ASN][1000 genomes]
rs73927424	0.82[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs7593932	0.82[ASN][1000 genomes]
rs952711	1.00[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs952712	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.86[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv430724	chr2:37546820-37628704	Weak transcription Flanking Active TSS Active TSS Enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	n/a
2	nsv2685	chr2:37550096-37594923	Active TSS Weak transcription Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Strong transcription Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:37553800-37562200	Weak transcription	Primary monocytes fromperipheralblood	blood
2	chr2:37557800-37558200	Enhancers	Primary neutrophils fromperipheralblood	blood
3	chr2:37557800-37558400	Enhancers	Monocytes-CD14+_RO01746	blood

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