The 2.0 version of rSNPBase

Variant report

Variant rs60993552
Chromosome Location chr9:94970189-94970190
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:118 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:94954400-94971000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
2 chr9:94959400-94971200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr9:94959400-94973200 Weak transcription Pancreas Pancrea
4 chr9:94959600-94970800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
5 chr9:94960600-94970400 Weak transcription Hela-S3 cervix
6 chr9:94966000-94973400 Weak transcription Esophagus oesophagus
7 chr9:94966600-94971200 Weak transcription Fetal Intestine Large intestine
8 chr9:94966800-94970800 Weak transcription Adipose Nuclei Adipose
9 chr9:94967000-94971000 Weak transcription HSMM muscle
10 chr9:94967200-94970800 Weak transcription Skeletal Muscle Female skeletal muscle
11 chr9:94967200-94970800 Weak transcription HSMMtube muscle
12 chr9:94967400-94970200 Weak transcription Left Ventricle heart
13 chr9:94967400-94970400 Weak transcription Primary T cells from cord blood blood
14 chr9:94967400-94971000 Weak transcription Brain Anterior Caudate brain
15 chr9:94967400-94971000 Weak transcription Fetal Brain Female brain
16 chr9:94967600-94971000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
17 chr9:94967600-94971000 Weak transcription Primary hematopoietic stem cells blood
18 chr9:94967600-94971400 Weak transcription Rectal Smooth Muscle rectum
19 chr9:94967800-94970800 Weak transcription Brain Hippocampus Middle brain
20 chr9:94967800-94970800 Weak transcription Psoas Muscle Psoas
21 chr9:94967800-94971200 Weak transcription Sigmoid Colon Sigmoid Colon
22 chr9:94968000-94970400 Weak transcription Rectal Mucosa Donor 29 rectum
23 chr9:94968000-94970800 Weak transcription Primary hematopoietic stem cells short term culture blood
24 chr9:94968000-94970800 Weak transcription Fetal Muscle Trunk muscle
25 chr9:94968200-94970400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
26 chr9:94968200-94970600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
27 chr9:94968200-94970600 Weak transcription HUES6 Cell Line embryonic stem cell
28 chr9:94968200-94970600 Weak transcription HMEC breast
29 chr9:94968200-94970800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
30 chr9:94968200-94971000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
31 chr9:94968200-94971000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
32 chr9:94968200-94971000 Weak transcription Brain Inferior Temporal Lobe brain
33 chr9:94968400-94971000 Weak transcription Cortex derived primary cultured neurospheres brain
34 chr9:94968600-94970400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
35 chr9:94968600-94970400 Weak transcription Liver Liver
36 chr9:94968600-94970800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
37 chr9:94968600-94971200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
38 chr9:94968800-94970400 Weak transcription Primary T helper naive cells fromperipheralblood blood
39 chr9:94968800-94970400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
40 chr9:94968800-94970400 Weak transcription Monocytes-CD14+_RO01746 blood
41 chr9:94968800-94970800 Weak transcription Primary T cells fromperipheralblood blood
42 chr9:94968800-94971000 Weak transcription H9 Cell Line embryonic stem cell
43 chr9:94968800-94971200 Weak transcription Fetal Stomach stomach
44 chr9:94968800-94971400 Weak transcription Right Ventricle heart
45 chr9:94968800-94972000 Weak transcription Fetal Intestine Small intestine
46 chr9:94968800-94976800 Strong transcription A549 lung
47 chr9:94969000-94970600 Weak transcription HUES48 Cell Line embryonic stem cell
48 chr9:94969000-94970600 Weak transcription iPS-18 Cell Line embryonic stem cell
49 chr9:94969000-94970600 Weak transcription iPS-20b Cell Line embryonic stem cell
50 chr9:94969000-94970800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell

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Last update: Aug 31, 2015