Variant report

Variant rs61007280
Chromosome Location chr1:162103772-162103773
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:40 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:162097600-162106600 Weak transcription H1 Cell Line embryonic stem cell
2 chr1:162098800-162107800 Enhancers Liver Liver
3 chr1:162098800-162109200 Enhancers Breast Myoepithelial Primary Cells Breast
4 chr1:162099200-162104400 Weak transcription HUES6 Cell Line embryonic stem cell
5 chr1:162099200-162105000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
6 chr1:162099200-162105400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
7 chr1:162099200-162105800 Weak transcription HUES64 Cell Line embryonic stem cell
8 chr1:162099200-162106800 Weak transcription ES-WA7 Cell Line embryonic stem cell
9 chr1:162099200-162106800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr1:162099400-162104600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
11 chr1:162100000-162109400 Enhancers Cortex derived primary cultured neurospheres brain
12 chr1:162100800-162105400 Enhancers Fetal Intestine Small intestine
13 chr1:162101600-162106200 Weak transcription Duodenum Smooth Muscle Duodenum
14 chr1:162101800-162106200 Weak transcription Small Intestine intestine
15 chr1:162101800-162106800 Enhancers Hela-S3 cervix
16 chr1:162102000-162106400 Weak transcription Fetal Kidney kidney
17 chr1:162102000-162107000 Weak transcription Brain Inferior Temporal Lobe brain
18 chr1:162102200-162104400 Weak transcription Adipose Nuclei Adipose
19 chr1:162102200-162104400 Weak transcription Fetal Adrenal Gland Adrenal Gland
20 chr1:162102200-162105600 Enhancers HepG2 liver
21 chr1:162102200-162106400 Weak transcription Rectal Smooth Muscle rectum
22 chr1:162102200-162106400 Weak transcription Stomach Mucosa stomach
23 chr1:162102200-162107000 Weak transcription Gastric stomach
24 chr1:162102400-162106200 Weak transcription Colon Smooth Muscle Colon
25 chr1:162102600-162104000 Enhancers Fetal Lung lung
26 chr1:162102800-162104000 Weak transcription Left Ventricle heart
27 chr1:162102800-162104000 Weak transcription Pancreas Pancrea
28 chr1:162102800-162104000 Weak transcription Right Atrium heart
29 chr1:162102800-162105000 Enhancers Fetal Heart heart
30 chr1:162102800-162105800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
31 chr1:162102800-162107200 Weak transcription Brain Substantia Nigra brain
32 chr1:162103000-162105400 Enhancers HSMMtube muscle
33 chr1:162103200-162103800 Enhancers HUVEC blood vessel
34 chr1:162103400-162103800 Enhancers Muscle Satellite Cultured Cells --
35 chr1:162103400-162104000 Enhancers HSMM muscle
36 chr1:162103400-162104200 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
37 chr1:162103600-162103800 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
38 chr1:162103600-162105200 Enhancers Fetal Intestine Large intestine
39 chr1:162103600-162105400 Enhancers Right Ventricle heart
40 chr1:162103600-162106200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived

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