Variant report

Variant	rs61063410
Chromosome Location	chr3:195425034-195425035
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:68)
CpG islands
(count:61)
Chromatin interactive
region (count:1)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:68 , 50 per page) page: 1 2

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	RFX5	chr3:195424474-195425409	K562	blood:	n/a	n/a
2	TBL1XR1	chr3:195424501-195426101	K562	blood:	n/a	n/a
3	CTCF	chr3:195424560-195425168	K562	blood:	n/a	n/a
4	ZMIZ1	chr3:195424404-195425595	K562	blood:	n/a	n/a
5	POLR2A	chr3:195424985-195425563	HUVEC	blood vessel:	n/a	n/a
6	MAX	chr3:195424992-195425215	H1-hESC	embryonic stem cell:	n/a	n/a
7	E2F4	chr3:195424619-195425383	MCF10A-Er-Src	breast:	n/a	n/a
8	CEBPB	chr3:195424765-195425151	IMR90	lung:	n/a	n/a
9	EP300	chr3:195424445-195425700	K562	blood:	n/a	n/a
10	POLR2A	chr3:195424724-195425177	SK-N-SH	brain:	n/a	n/a
11	MAFF	chr3:195424466-195426001	K562	blood:	n/a	n/a
12	ZNF274	chr3:195424440-195427112	K562	blood:	n/a	n/a
13	STAT3	chr3:195424624-195425098	MCF10A-Er-Src	breast:	n/a	n/a
14	CEBPB	chr3:195424776-195425088	K562	blood:	n/a	n/a
15	FOS	chr3:195424682-195425108	MCF10A-Er-Src	breast:	n/a	n/a
16	POLR2A	chr3:195424444-195425230	K562	blood:	n/a	n/a
17	ZNF384	chr3:195424427-195425422	K562	blood:	n/a	n/a
18	BCL3	chr3:195424279-195425594	A549	lung:	n/a	n/a
19	POLR2A	chr3:195424257-195426602	U87	brain:	n/a	n/a
20	TBL1XR1	chr3:195424427-195425981	K562	blood:	n/a	n/a
21	MAFK	chr3:195424718-195425290	IMR90	lung:	n/a	n/a
22	POLR2A	chr3:195423523-195426056	HepG2	liver:	n/a	n/a
23	BACH1	chr3:195424543-195425190	H1-hESC	embryonic stem cell:	n/a	n/a
24	NFE2	chr3:195424723-195425096	K562	blood:	n/a	n/a
25	POLR2A	chr3:195424358-195428985	K562	blood:	n/a	n/a
26	STAT3	chr3:195424745-195425036	MCF10A-Er-Src	breast:	n/a	n/a
27	POLR2A	chr3:195424625-195425631	U87	brain:	n/a	n/a
28	CTCF	chr3:195424960-195425110	HCPEpiC	choroid plexus:	n/a	n/a
29	FOS	chr3:195424680-195425098	MCF10A-Er-Src	breast:	n/a	n/a
30	FOSL2	chr3:195424612-195425248	A549	lung:	n/a	n/a
31	GTF2F1	chr3:195424375-195425460	K562	blood:	n/a	n/a
32	ZNF143	chr3:195424454-195426444	K562	blood:	n/a	n/a
33	BHLHE40	chr3:195424474-195425479	K562	blood:	n/a	n/a
34	GTF2F1	chr3:195424898-195425371	H1-hESC	embryonic stem cell:	n/a	n/a
35	STAT3	chr3:195424733-195425221	MCF10A-Er-Src	breast:	n/a	n/a
36	POLR2A	chr3:195423335-195433464	K562	blood:	n/a	n/a
37	STAT3	chr3:195424740-195425088	MCF10A-Er-Src	breast:	n/a	n/a
38	POLR2A	chr3:195424287-195425471	K562	blood:	n/a	n/a
39	IRF1	chr3:195424642-195425098	K562	blood:	n/a	n/a
40	MAFK	chr3:195424718-195425248	H1-hESC	embryonic stem cell:	n/a	n/a
41	POLR2A	chr3:195424347-195425417	MCF-7	breast:	n/a	n/a
42	POLR2A	chr3:195424699-195426058	ECC-1	luminal epithelium:	n/a	n/a
43	POLR2A	chr3:195424872-195425622	HepG2	liver:	n/a	n/a
44	FOS	chr3:195424613-195425167	MCF10A-Er-Src	breast:	n/a	n/a
45	POLR2A	chr3:195424227-195429081	SK-N-MC	brain:	n/a	n/a
46	MYC	chr3:195424551-195425521	K562	blood:	n/a	n/a
47	RCOR1	chr3:195424639-195425782	K562	blood:	n/a	n/a
48	HCFC1	chr3:195424453-195426086	K562	blood:	n/a	n/a
49	ARID3A	chr3:195424609-195425555	K562	blood:	n/a	n/a
50	RCOR1	chr3:195424368-195425852	K562	blood:	n/a	n/a

(count:61 , 50 per page) page: 1 2

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr3:195425033-195425083	CMK	blood:	n/a
2	chr3:195425033-195425083	GM06990	blood:	n/a
3	chr3:195425033-195425083	H1-hESC	embryonic stem cell:	embryo
4	chr3:195425033-195425083	SKMC	muscle:	n/a
5	chr3:195425033-195425083	AG09319	gingival:	n/a
6	chr3:195425033-195425083	Hela-S3	cervix:	n/a
7	chr3:195425033-195425083	HRCEpiC	kidney:	n/a
8	chr3:195425033-195425083	GM12892	blood:	n/a
9	chr3:195425033-195425083	LNCaP	prostate:	n/a
10	chr3:195425033-195425083	T-47D	breast:	n/a
11	chr3:195425033-195425083	A549	lung:	n/a
12	chr3:195425033-195425083	SAEC	small airway:	n/a
13	chr3:195425033-195425083	HAEpiC	amniotic membrane:	n/a
14	chr3:195425033-195425083	HMEC	breast:	n/a
15	chr3:195425033-195425083	HCM	heart:	n/a
16	chr3:195425033-195425083	U87	brain:	n/a
17	chr3:195425033-195425083	AoSMC	blood vessel:	n/a
18	chr3:195425033-195425083	GM12878	blood:	n/a
19	chr3:195425033-195425083	NHDF-neo	bronchial:	n/a
20	chr3:195425033-195425083	HRPEpiC	eye:	n/a
21	chr3:195425033-195425083	MCF10A-Er-Src	breast:	n/a
22	chr3:195425033-195425083	ovcar-3	ovarian:	n/a
23	chr3:195425033-195425083	K562	blood:	n/a
24	chr3:195425033-195425083	Hepatocyte	liver:	n/a
25	chr3:195425033-195425083	HUVEC	blood vessel:	n/a
26	chr3:195425033-195425083	SK-N-MC	brain:	n/a
27	chr3:195425033-195425083	HPAEpiC	pulmonary alveolar:	n/a
28	chr3:195425033-195425083	HRE	kidney:	n/a
29	chr3:195425033-195425083	NT2-D1	testis:	n/a
30	chr3:195425033-195425083	SK-N-SH	brain:	n/a
31	chr3:195425033-195425083	HCPEpiC	choroid plexus:	n/a
32	chr3:195425033-195425083	GM19239	blood:	n/a
33	chr3:195425033-195425083	GM12891	blood:	n/a
34	chr3:195425033-195425083	NH-A	brain:	n/a
35	chr3:195425033-195425083	Jurkat	blood:	n/a
36	chr3:195425033-195425083	Caco-2	colon:	n/a
37	chr3:195425033-195425083	HCF	heart:	n/a
38	chr3:195425033-195425083	AG09309	skin:	n/a
39	chr3:195425033-195425083	PFSK-1	brain:	n/a
40	chr3:195425033-195425083	ProgFib	skin:	n/a
41	chr3:195425033-195425083	HCT-116	colon:	n/a
42	chr3:195425033-195425083	HEEpiC	esophagus:	n/a
43	chr3:195425033-195425083	RPTEC	kidney:	n/a
44	chr3:195425033-195425083	SK-N-SH_RA	brain:	n/a
45	chr3:195425033-195425083	HIPEpiC	eye:	n/a
46	chr3:195425033-195425083	AG10803	skin:	n/a
47	chr3:195425033-195425083	AG04450	lung:	fetal
48	chr3:195425033-195425083	BE2_C	brain:	n/a
49	chr3:195425033-195425083	HNPCEpiC	eye:	n/a
50	chr3:195425033-195425083	IMR90	lung:	fetal

(count:1 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr3:195423605..195425145-chr3:195576844..195578460,2	MCF-7	breast:

No data

Variant related genes	Relation type
LINC00969	TF binding region
MIR570	TF binding region
MIR570	CpG island
LINC00969	CpG island

Extended variants
information (count: 276 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:4)

rs_ID	r²[population]
rs56042978	0.82[AMR][1000 genomes]
rs60945664	0.83[AMR][1000 genomes]
rs6766051	0.82[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs6792153	0.81[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:272 , 50 per page) page: 1 2 3 4 5 6

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1014826	chr3:194834615-195631793	Enhancers Bivalent Enhancer Weak transcription Flanking Active TSS Active TSS Strong transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	73 gene(s)	inside rSNPs	diseases
2	nsv536876	chr3:194834615-195631793	Strong transcription Flanking Active TSS Weak transcription Enhancers Active TSS ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	73 gene(s)	inside rSNPs	diseases
3	nsv533904	chr3:194868329-195438728	Enhancers Weak transcription Flanking Active TSS Strong transcription Genic enhancers Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	65 gene(s)	inside rSNPs	diseases
4	esv1832781	chr3:194902818-195528226	Strong transcription Enhancers Weak transcription Flanking Active TSS Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	62 gene(s)	inside rSNPs	diseases
5	nsv432508	chr3:194916131-195478861	Strong transcription Enhancers Weak transcription Genic enhancers Active TSS Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	59 gene(s)	inside rSNPs	diseases
6	nsv432510	chr3:194935314-195478861	Weak transcription Enhancers Strong transcription Active TSS Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	59 gene(s)	inside rSNPs	diseases
7	nsv432511	chr3:194986167-195479748	Weak transcription Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers Genic enhancers Active TSS ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	57 gene(s)	inside rSNPs	diseases
8	nsv432512	chr3:195007260-195475989	Enhancers Weak transcription Active TSS Genic enhancers Strong transcription ZNF genes & repeats Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	54 gene(s)	inside rSNPs	diseases
9	nsv878138	chr3:195057001-195477791	Enhancers Active TSS Genic enhancers Flanking Active TSS Strong transcription Weak transcription Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	53 gene(s)	inside rSNPs	diseases
10	nsv1006229	chr3:195071421-195474751	Weak transcription Flanking Active TSS Active TSS Genic enhancers Enhancers Strong transcription ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	53 gene(s)	inside rSNPs	diseases
11	esv2754364	chr3:195102703-195553690	Enhancers Weak transcription Genic enhancers Bivalent Enhancer Active TSS Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	54 gene(s)	inside rSNPs	diseases
12	esv2757028	chr3:195102787-195479748	Active TSS Enhancers Strong transcription Flanking Active TSS Bivalent Enhancer Weak transcription Bivalent/Poised TSS ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	53 gene(s)	inside rSNPs	diseases
13	esv2759213	chr3:195102787-196071593	Active TSS Weak transcription Flanking Active TSS Strong transcription Enhancers Bivalent Enhancer Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	144 gene(s)	inside rSNPs	diseases
14	nsv432513	chr3:195121072-195478861	Strong transcription Weak transcription Active TSS Enhancers Bivalent Enhancer Genic enhancers Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	52 gene(s)	inside rSNPs	diseases
15	nsv432514	chr3:195121110-195478861	Bivalent Enhancer Weak transcription Flanking Active TSS Enhancers Active TSS Flanking Bivalent TSS/Enh Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	52 gene(s)	inside rSNPs	diseases
16	nsv432515	chr3:195121110-195528226	Weak transcription Enhancers Strong transcription Bivalent Enhancer ZNF genes & repeats Genic enhancers Active TSS Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	54 gene(s)	inside rSNPs	diseases
17	esv1845367	chr3:195175217-195486486	Strong transcription Genic enhancers Flanking Active TSS Enhancers Weak transcription Active TSS Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	33 gene(s)	inside rSNPs	diseases
18	nsv1001387	chr3:195186128-195661538	Bivalent Enhancer Weak transcription Strong transcription Active TSS Enhancers Genic enhancers Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	49 gene(s)	inside rSNPs	diseases
19	esv1808194	chr3:195201080-195619882	Enhancers Strong transcription Active TSS Weak transcription Flanking Active TSS Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	38 gene(s)	inside rSNPs	diseases
20	esv1849415	chr3:195201080-195619882	Flanking Active TSS Enhancers Strong transcription Weak transcription Genic enhancers Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	38 gene(s)	inside rSNPs	diseases
21	esv1850702	chr3:195201080-195619882	Enhancers Weak transcription Active TSS ZNF genes & repeats Bivalent Enhancer Flanking Active TSS Genic enhancers Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	38 gene(s)	inside rSNPs	diseases
22	nsv428102	chr3:195201080-195829426	Weak transcription Enhancers Bivalent/Poised TSS Flanking Active TSS Strong transcription Bivalent Enhancer Genic enhancers Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	88 gene(s)	inside rSNPs	diseases
23	nsv428430	chr3:195201080-195829426	Strong transcription Enhancers Weak transcription Active TSS Genic enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	88 gene(s)	inside rSNPs	diseases
24	nsv1007617	chr3:195240812-195474751	Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS Genic enhancers Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	32 gene(s)	inside rSNPs	diseases
25	esv2763776	chr3:195240824-195502119	Weak transcription Bivalent Enhancer Enhancers Genic enhancers Active TSS Strong transcription Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	33 gene(s)	inside rSNPs	diseases
26	nsv1010725	chr3:195249924-195459762	Strong transcription Weak transcription Enhancers Active TSS Flanking Active TSS Genic enhancers ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	32 gene(s)	inside rSNPs	diseases
27	nsv1010480	chr3:195259254-195436069	Weak transcription Strong transcription Flanking Active TSS Active TSS Enhancers Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	31 gene(s)	inside rSNPs	diseases
28	nsv536879	chr3:195259254-195436069	Weak transcription Strong transcription Flanking Active TSS Active TSS Enhancers Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	31 gene(s)	inside rSNPs	diseases
29	nsv1007146	chr3:195259289-195442570	Strong transcription Weak transcription Active TSS Enhancers Flanking Active TSS Genic enhancers ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	32 gene(s)	inside rSNPs	diseases
30	nsv1005951	chr3:195259289-195474751	Genic enhancers Weak transcription ZNF genes & repeats Strong transcription Active TSS Enhancers Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	32 gene(s)	inside rSNPs	diseases
31	nsv432518	chr3:195262521-195475989	Bivalent/Poised TSS Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Strong transcription Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	32 gene(s)	inside rSNPs	diseases
32	nsv432517	chr3:195262521-195476085	Genic enhancers Enhancers Bivalent Enhancer Weak transcription Strong transcription Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	32 gene(s)	inside rSNPs	diseases
33	nsv432516	chr3:195262521-195501938	Flanking Bivalent TSS/Enh Enhancers Flanking Active TSS Weak transcription Strong transcription Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	33 gene(s)	inside rSNPs	diseases
34	nsv915895	chr3:195263824-195457677	Strong transcription Bivalent/Poised TSS Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA	32 gene(s)	inside rSNPs	diseases
35	nsv533198	chr3:195263979-195459589	Enhancers ZNF genes & repeats Weak transcription Active TSS Bivalent Enhancer Strong transcription Genic enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	32 gene(s)	inside rSNPs	diseases
36	nsv534205	chr3:195263987-195463502	Enhancers Weak transcription Active TSS Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA	32 gene(s)	inside rSNPs	diseases
37	nsv1012885	chr3:195268908-195459762	Flanking Active TSS Active TSS Weak transcription Strong transcription Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	31 gene(s)	inside rSNPs	diseases
38	nsv1009947	chr3:195275383-195464854	Weak transcription Enhancers Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription Active TSS Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	27 gene(s)	inside rSNPs	diseases
39	nsv1001683	chr3:195275383-195474751	Enhancers Weak transcription Active TSS Genic enhancers Strong transcription Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	27 gene(s)	inside rSNPs	diseases
40	nsv1008944	chr3:195276060-195442570	Flanking Active TSS Active TSS Enhancers Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	27 gene(s)	inside rSNPs	diseases
41	nsv1013035	chr3:195276060-195446910	Enhancers Weak transcription Strong transcription Flanking Active TSS Active TSS Bivalent Enhancer Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	27 gene(s)	inside rSNPs	diseases
42	nsv1009773	chr3:195276060-195456889	Enhancers Weak transcription Transcr. at gene 5' and 3' Strong transcription Active TSS Bivalent Enhancer Genic enhancers Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	27 gene(s)	inside rSNPs	diseases
43	nsv517517	chr3:195279119-195517258	Weak transcription Strong transcription Enhancers Bivalent Enhancer ZNF genes & repeats Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	29 gene(s)	inside rSNPs	diseases
44	nsv1008027	chr3:195279198-195442570	Active TSS Weak transcription Strong transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	27 gene(s)	inside rSNPs	diseases
45	nsv999355	chr3:195279198-195446585	ZNF genes & repeats Weak transcription Genic enhancers Enhancers Strong transcription Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	27 gene(s)	inside rSNPs	diseases
46	nsv1009953	chr3:195279198-195446910	ZNF genes & repeats Strong transcription Weak transcription Enhancers Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	27 gene(s)	inside rSNPs	diseases
47	nsv1010428	chr3:195279198-195456036	Weak transcription ZNF genes & repeats Strong transcription Enhancers Genic enhancers Flanking Active TSS Active TSS Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	27 gene(s)	inside rSNPs	diseases
48	nsv1009930	chr3:195279198-195464854	Weak transcription Genic enhancers Enhancers Active TSS Strong transcription ZNF genes & repeats Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	27 gene(s)	inside rSNPs	diseases
49	nsv1004538	chr3:195279198-195474751	Enhancers Weak transcription Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer Strong transcription Active TSS Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	27 gene(s)	inside rSNPs	diseases
50	nsv1014026	chr3:195284382-195442570	Weak transcription Active TSS Transcr. at gene 5' and 3' Genic enhancers Flanking Active TSS Enhancers Strong transcription Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	27 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:125 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:195392000-195445400	Weak transcription	Fetal Kidney	kidney
2	chr3:195408800-195427200	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
3	chr3:195409000-195427400	Strong transcription	Primary T cells from cord blood	blood
4	chr3:195411400-195438400	Weak transcription	Placenta Amnion	Placenta Amnion
5	chr3:195411400-195441400	Weak transcription	Pancreatic Islets	Pancreatic Islet
6	chr3:195411600-195432400	Weak transcription	Small Intestine	intestine
7	chr3:195414400-195426000	Strong transcription	Primary monocytes fromperipheralblood	blood
8	chr3:195414600-195425200	Strong transcription	Breast Myoepithelial Primary Cells	Breast
9	chr3:195415800-195426800	Strong transcription	Duodenum Mucosa	Duodenum
10	chr3:195415800-195427200	Strong transcription	Rectal Mucosa Donor 29	rectum
11	chr3:195416800-195425200	Strong transcription	Placenta	Placenta
12	chr3:195416800-195432400	Weak transcription	HepG2	liver
13	chr3:195417600-195427000	Strong transcription	Sigmoid Colon	Sigmoid Colon
14	chr3:195417800-195426800	Strong transcription	Fetal Stomach	stomach
15	chr3:195418800-195427000	Strong transcription	Primary B cells from cord blood	blood
16	chr3:195419400-195435800	Weak transcription	Primary T helper naive cells from peripheral blood	blood
17	chr3:195419600-195429000	Strong transcription	Colonic Mucosa	Colon
18	chr3:195419600-195438400	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
19	chr3:195419600-195438400	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
20	chr3:195419600-195442600	Weak transcription	Stomach Mucosa	stomach
21	chr3:195421400-195435400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
22	chr3:195421600-195427000	Strong transcription	Fetal Adrenal Gland	Adrenal Gland
23	chr3:195421600-195427000	Weak transcription	Fetal Heart	heart
24	chr3:195421600-195435200	Weak transcription	Primary T killer memory cells from peripheral blood	blood
25	chr3:195421600-195436200	Weak transcription	Primary T helper cells PMA-I stimulated	--
26	chr3:195422000-195425200	Weak transcription	Fetal Thymus	thymus
27	chr3:195422000-195426600	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
28	chr3:195422000-195427600	Weak transcription	Primary neutrophils fromperipheralblood	blood
29	chr3:195422000-195433200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
30	chr3:195422000-195435200	Weak transcription	Liver	Liver
31	chr3:195422000-195435200	Weak transcription	Rectal Mucosa Donor 31	rectum
32	chr3:195422200-195425400	Weak transcription	Fetal Brain Male	brain
33	chr3:195422400-195428400	Weak transcription	Gastric	stomach
34	chr3:195423000-195425200	Strong transcription	Thymus	Thymus
35	chr3:195423000-195426600	Strong transcription	Fetal Muscle Trunk	muscle
36	chr3:195423000-195427000	Strong transcription	Dnd41	blood
37	chr3:195423000-195427200	Strong transcription	Ovary	ovary
38	chr3:195423000-195427600	Strong transcription	Fetal Brain Female	brain
39	chr3:195423200-195427000	Strong transcription	Monocytes-CD14+_RO01746	blood
40	chr3:195423400-195425200	Strong transcription	Primary T helper naive cells fromperipheralblood	blood
41	chr3:195423400-195425200	Strong transcription	Primary T helper cells fromperipheralblood	blood
42	chr3:195423400-195425200	Strong transcription	Rectal Smooth Muscle	rectum
43	chr3:195423400-195426000	Genic enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
44	chr3:195423400-195426400	Strong transcription	Primary mononuclear cells fromperipheralblood	Blood
45	chr3:195423400-195427000	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
46	chr3:195423400-195427000	Strong transcription	Pancreas	Pancrea
47	chr3:195423400-195427200	Strong transcription	Primary T cells fromperipheralblood	blood
48	chr3:195423400-195427200	Strong transcription	Primary T regulatory cells fromperipheralblood	blood
49	chr3:195423400-195427600	Strong transcription	Brain Germinal Matrix	brain
50	chr3:195423600-195425200	Genic enhancers	Foreskin Melanocyte Primary Cells skin03	Skin

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