Variant report

Variant	rs61103910
Chromosome Location	chr8:9446769-9446770
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:9445664..9448408-chr8:9450889..9452494,2	K562	blood:

Extended variants
information (count: 7 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:4)

rs_ID	r²[population]
rs58190269	1.00[AFR][1000 genomes]
rs60163152	1.00[AFR][1000 genomes]
rs73662510	1.00[AFR][1000 genomes]
rs73664780	1.00[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv530864	chr8:9097498-9914548	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	39 gene(s)	inside rSNPs	diseases
2	nsv497927	chr8:9097611-9544519	Flanking Active TSS Enhancers Strong transcription Weak transcription Bivalent Enhancer ZNF genes & repeats Active TSS Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases
3	nsv981863	chr8:9446521-9455100	Weak transcription Enhancers Flanking Active TSS Strong transcription Active TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases

No data

Chromatin state (count:95 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:9414400-9459600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr8:9417200-9450000	Weak transcription	Skeletal Muscle Female	skeletal muscle
3	chr8:9427400-9450000	Weak transcription	Thymus	Thymus
4	chr8:9428200-9466200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
5	chr8:9428400-9450000	Weak transcription	Psoas Muscle	Psoas
6	chr8:9429000-9450000	Weak transcription	Fetal Kidney	kidney
7	chr8:9430200-9449800	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
8	chr8:9431000-9447000	Weak transcription	Brain Substantia Nigra	brain
9	chr8:9431000-9448800	Weak transcription	Rectal Smooth Muscle	rectum
10	chr8:9431000-9449400	Weak transcription	Duodenum Smooth Muscle	Duodenum
11	chr8:9431000-9450000	Weak transcription	Colon Smooth Muscle	Colon
12	chr8:9432000-9448200	Weak transcription	Fetal Brain Male	brain
13	chr8:9433600-9461000	Weak transcription	Fetal Stomach	stomach
14	chr8:9434800-9459000	Weak transcription	Primary B cells from cord blood	blood
15	chr8:9435200-9448800	Weak transcription	HUVEC	blood vessel
16	chr8:9435400-9448800	Weak transcription	NHLF	lung
17	chr8:9435400-9449800	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
18	chr8:9435400-9465600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
19	chr8:9435400-9468400	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
20	chr8:9435600-9448800	Weak transcription	A549	lung
21	chr8:9435600-9449000	Weak transcription	Liver	Liver
22	chr8:9435600-9449600	Weak transcription	Primary hematopoietic stem cells	blood
23	chr8:9435600-9450000	Weak transcription	Small Intestine	intestine
24	chr8:9435600-9457600	Weak transcription	Fetal Muscle Leg	muscle
25	chr8:9435600-9472400	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
26	chr8:9435800-9447000	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
27	chr8:9435800-9447400	Weak transcription	Gastric	stomach
28	chr8:9435800-9447400	Weak transcription	Ovary	ovary
29	chr8:9435800-9447400	Weak transcription	Right Atrium	heart
30	chr8:9435800-9448800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
31	chr8:9435800-9448800	Weak transcription	Spleen	Spleen
32	chr8:9435800-9449600	Weak transcription	Stomach Mucosa	stomach
33	chr8:9435800-9459400	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
34	chr8:9435800-9465400	Weak transcription	Lung	lung
35	chr8:9435800-9465600	Weak transcription	Pancreas	Pancrea
36	chr8:9435800-9472600	Weak transcription	HSMMtube	muscle
37	chr8:9436000-9449600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
38	chr8:9436400-9448800	Weak transcription	Duodenum Mucosa	Duodenum
39	chr8:9437400-9448800	Weak transcription	Fetal Brain Female	brain
40	chr8:9437400-9449200	Weak transcription	Muscle Satellite Cultured Cells	--
41	chr8:9437400-9468000	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
42	chr8:9437800-9447000	Weak transcription	Left Ventricle	heart
43	chr8:9437800-9447000	Weak transcription	Right Ventricle	heart
44	chr8:9438000-9450000	Weak transcription	K562	blood
45	chr8:9439200-9448800	Weak transcription	Rectal Mucosa Donor 29	rectum
46	chr8:9439200-9449400	Weak transcription	Rectal Mucosa Donor 31	rectum
47	chr8:9439200-9450000	Weak transcription	HUES6 Cell Line	embryonic stem cell
48	chr8:9439200-9450000	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
49	chr8:9439400-9448800	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
50	chr8:9439400-9449000	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow

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