Variant report

Variant	rs61145421
Chromosome Location	chr4:78359788-78359789
allele	-/ACTCTCACACTC
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 17 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:16)

rs_ID	r²[population]
rs17002681	0.81[AMR][1000 genomes]
rs17002682	0.81[AMR][1000 genomes]
rs2866292	0.81[AMR][1000 genomes]
rs4859842	0.81[AMR][1000 genomes]
rs4859843	0.81[AMR][1000 genomes]
rs4859844	0.81[AMR][1000 genomes]
rs4859845	0.81[AMR][1000 genomes]
rs4859846	0.81[AMR][1000 genomes]
rs55685718	0.81[AMR][1000 genomes]
rs55915318	0.81[AMR][1000 genomes]
rs56092580	0.81[AMR][1000 genomes]
rs62302436	0.81[AMR][1000 genomes]
rs62302437	0.81[AMR][1000 genomes]
rs62302438	0.81[AMR][1000 genomes]
rs62302439	0.81[AMR][1000 genomes]
rs7670432	0.81[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv829974	chr4:78240718-78415642	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:78357400-78361800	Weak transcription	Ovary	ovary
2	chr4:78357400-78373800	Weak transcription	Spleen	Spleen
3	chr4:78359000-78360800	Weak transcription	Esophagus	oesophagus

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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