Variant report

Variant	rs61179915
Chromosome Location	chr4:26843273-26843274
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:6)

rs_ID	r²[population]
rs28589741	1.00[EUR][1000 genomes]
rs59430512	1.00[EUR][1000 genomes]
rs60368782	1.00[EUR][1000 genomes]
rs6848882	1.00[EUR][1000 genomes]
rs7656787	1.00[EUR][1000 genomes]
rs7698122	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv470021	chr4:26721578-27067027	Active TSS Strong transcription Enhancers Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
2	nsv1001306	chr4:26821511-26955344	Weak transcription Flanking Active TSS Enhancers Genic enhancers Active TSS Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:26840000-26858800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr4:26840600-26844200	Weak transcription	Primary monocytes fromperipheralblood	blood
3	chr4:26841200-26843400	Enhancers	Thymus	Thymus
4	chr4:26841400-26845400	Weak transcription	Gastric	stomach
5	chr4:26841400-26858600	Weak transcription	Aorta	Aorta
6	chr4:26841600-26843600	Weak transcription	Right Atrium	heart
7	chr4:26841600-26858600	Weak transcription	Muscle Satellite Cultured Cells	--
8	chr4:26842200-26843400	Enhancers	Fetal Thymus	thymus
9	chr4:26842400-26858800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
10	chr4:26842800-26845800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
11	chr4:26842800-26846400	Weak transcription	Breast Myoepithelial Primary Cells	Breast

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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