Variant report

Variant rs6118967
Chromosome Location chr20:29519882-29519883
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:51 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr20:29518200-29520000 Active TSS Brain Angular Gyrus brain
2 chr20:29518200-29520000 Active TSS Fetal Kidney kidney
3 chr20:29518600-29521200 Transcr. at gene 5' and 3' Dnd41 blood
4 chr20:29519000-29520000 Active TSS Brain Inferior Temporal Lobe brain
5 chr20:29519000-29520200 Active TSS Brain Cingulate Gyrus brain
6 chr20:29519000-29521200 Active TSS Brain Anterior Caudate brain
7 chr20:29519000-29523800 Weak transcription Primary T helper cells fromperipheralblood blood
8 chr20:29519000-29524200 Weak transcription Small Intestine intestine
9 chr20:29519000-29524400 Weak transcription Primary T cells from cord blood blood
10 chr20:29519000-29524400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
11 chr20:29519000-29524400 Weak transcription Aorta Aorta
12 chr20:29519000-29524800 Weak transcription Primary B cells from cord blood blood
13 chr20:29519200-29520000 Enhancers Primary Natural Killer cells fromperipheralblood blood
14 chr20:29519200-29523000 Weak transcription Right Atrium heart
15 chr20:29519200-29523600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
16 chr20:29519200-29523800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
17 chr20:29519200-29523800 Weak transcription Primary T killer naive cells fromperipheralblood blood
18 chr20:29519200-29523800 Weak transcription Osteobl bone
19 chr20:29519200-29524200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
20 chr20:29519200-29524200 Weak transcription HSMMtube muscle
21 chr20:29519400-29521000 Weak transcription Primary B cells from peripheral blood blood
22 chr20:29519400-29523800 Weak transcription Primary T helper naive cells fromperipheralblood blood
23 chr20:29519400-29523800 Weak transcription Primary T killer memory cells from peripheral blood blood
24 chr20:29519400-29524200 Weak transcription Sigmoid Colon Sigmoid Colon
25 chr20:29519400-29525000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
26 chr20:29519600-29520200 Active TSS Pancreas Pancrea
27 chr20:29519600-29520400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
28 chr20:29519600-29520400 Weak transcription Esophagus oesophagus
29 chr20:29519600-29520400 Weak transcription K562 blood
30 chr20:29519600-29520600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
31 chr20:29519600-29520600 Weak transcription Duodenum Mucosa Duodenum
32 chr20:29519600-29520600 Weak transcription Gastric stomach
33 chr20:29519600-29520800 Weak transcription Spleen Spleen
34 chr20:29519600-29522200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
35 chr20:29519600-29522800 Weak transcription Primary hematopoietic stem cells blood
36 chr20:29519600-29523000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
37 chr20:29519600-29523200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
38 chr20:29519600-29523200 Weak transcription Duodenum Smooth Muscle Duodenum
39 chr20:29519600-29523600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
40 chr20:29519600-29523600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
41 chr20:29519600-29523600 Weak transcription Rectal Mucosa Donor 31 rectum
42 chr20:29519600-29523600 Weak transcription Thymus Thymus
43 chr20:29519600-29523600 Weak transcription NH-A brain
44 chr20:29519600-29523800 Weak transcription Primary T regulatory cells fromperipheralblood blood
45 chr20:29519600-29523800 Weak transcription Brain Hippocampus Middle brain
46 chr20:29519600-29523800 Weak transcription Left Ventricle heart
47 chr20:29519600-29523800 Weak transcription Rectal Mucosa Donor 29 rectum
48 chr20:29519600-29524600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
49 chr20:29519800-29520200 Weak transcription Stomach Mucosa stomach
50 chr20:29519800-29521200 Active TSS Brain Germinal Matrix brain

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