Variant report

Variant	rs61212057
Chromosome Location	chr11:76444635-76444636
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:0)
Chromatin interactive
region (count:8)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

No data

(count:8 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:76444321..76446462-chr11:76517342..76520030,2	K562	blood:
2	chr11:76444616..76445153-chr11:76518177..76519095,2	MCF-7	breast:
3	chr11:76444600..76445268-chr11:76549508..76550407,4	MCF-7	breast:
4	chr11:76443783..76447678-chr11:76493146..76497317,7	MCF-7	breast:
5	chr11:76444583..76446069-chr11:76756756..76757887,9	MCF-7	breast:
6	chr11:76443601..76445826-chr11:76571953..76574772,2	K562	blood:
7	chr11:76444256..76445576-chr11:76630135..76631218,4	K562	blood:
8	chr11:76432736..76434565-chr11:76442976..76445333,2	MCF-7	breast:

No data

No data

No data

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:6)

rs_ID	r²[population]
rs12099277	1.00[AMR][1000 genomes]
rs2099787	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs60205654	1.00[AMR][1000 genomes]
rs61560547	1.00[AMR][1000 genomes]
rs7101546	1.00[AMR][1000 genomes]
rs73501594	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1810781	chr11:76311021-76464814	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription Active TSS ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	14 gene(s)	inside rSNPs	diseases
2	esv1850014	chr11:76384895-76464814	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
3	nsv976471	chr11:76435262-76459660	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	5 gene(s)	inside rSNPs	diseases
4	nsv430404	chr11:76436952-76462852	Weak transcription Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS	Chromatin interactive region	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:76433400-76456400	Weak transcription	Right Atrium	heart
2	chr11:76441200-76445200	Weak transcription	Fetal Intestine Small	intestine
3	chr11:76441400-76450200	Weak transcription	Liver	Liver
4	chr11:76441600-76445200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
5	chr11:76441600-76445600	Weak transcription	Fetal Intestine Large	intestine
6	chr11:76442800-76445000	Weak transcription	K562	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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