Variant report

Variant	rs6131691
Chromosome Location	chr20:15720528-15720529
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs6131692	0.96[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:8 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv869328	chr20:15325423-16213898	Flanking Active TSS Enhancers ZNF genes & repeats Weak transcription Bivalent Enhancer Active TSS Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
2	nsv833928	chr20:15619962-15780758	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases
3	nsv912791	chr20:15702037-15759361	Enhancers Active TSS Weak transcription Flanking Active TSS Bivalent Enhancer ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
4	esv1795570	chr20:15710525-15720528	Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
5	esv1806640	chr20:15710525-15720528	Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
6	esv1825901	chr20:15710525-15720528	Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
7	esv1834289	chr20:15710525-15720528	Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
8	esv1834996	chr20:15710525-15720528	Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr20:15719200-15720800	Enhancers	Hela-S3	cervix
2	chr20:15719800-15721200	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
3	chr20:15719800-15721600	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
4	chr20:15720000-15721200	Enhancers	HUES48 Cell Line	embryonic stem cell
5	chr20:15720000-15721600	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
6	chr20:15720200-15721000	Enhancers	HUES6 Cell Line	embryonic stem cell
7	chr20:15720200-15721200	Enhancers	ES-I3 Cell Line	embryonic stem cell
8	chr20:15720200-15721200	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
9	chr20:15720400-15721000	Enhancers	iPS-15b Cell Line	embryonic stem cell
10	chr20:15720400-15721000	Enhancers	iPS-20b Cell Line	embryonic stem cell
11	chr20:15720400-15721400	Enhancers	Breast Myoepithelial Primary Cells	Breast
12	chr20:15720400-15722000	Enhancers	HMEC	breast

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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