Variant report

Variant rs61317090
Chromosome Location chr6:5754289-5754290
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:26 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:5727000-5762400 Weak transcription Stomach Smooth Muscle stomach
2 chr6:5736800-5754400 Weak transcription Pancreas Pancrea
3 chr6:5748800-5754400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
4 chr6:5750400-5754400 Weak transcription Rectal Mucosa Donor 31 rectum
5 chr6:5752000-5754400 Weak transcription Right Ventricle heart
6 chr6:5753000-5754400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
7 chr6:5753000-5754400 Weak transcription Osteobl bone
8 chr6:5753000-5754600 Enhancers Skeletal Muscle Male skeletal muscle
9 chr6:5753000-5756200 Weak transcription NH-A brain
10 chr6:5753000-5786000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
11 chr6:5753200-5754400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
12 chr6:5753200-5754400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
13 chr6:5753200-5754400 Weak transcription HUES64 Cell Line embryonic stem cell
14 chr6:5753200-5754400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
15 chr6:5753400-5754400 Weak transcription H1 Cell Line embryonic stem cell
16 chr6:5753400-5761000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
17 chr6:5753400-5764200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
18 chr6:5753600-5757000 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
19 chr6:5753800-5754600 ZNF genes & repeats Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
20 chr6:5753800-5754800 ZNF genes & repeats hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
21 chr6:5753800-5755200 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
22 chr6:5754000-5754600 ZNF genes & repeats Aorta Aorta
23 chr6:5754000-5754600 Enhancers Psoas Muscle Psoas
24 chr6:5754000-5754800 Enhancers Skeletal Muscle Female skeletal muscle
25 chr6:5754000-5755400 ZNF genes & repeats Primary T cells from cord blood blood
26 chr6:5754200-5754800 ZNF genes & repeats iPS-20b Cell Line embryonic stem cell

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