Variant report

Variant rs6132792
Chromosome Location chr20:25027331-25027332
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:87 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr20:25016600-25027600 Enhancers Right Atrium heart
2 chr20:25016600-25034800 Weak transcription A549 lung
3 chr20:25017800-25029000 Genic enhancers Placenta Placenta
4 chr20:25017800-25034200 Weak transcription Fetal Kidney kidney
5 chr20:25020600-25037400 Enhancers Psoas Muscle Psoas
6 chr20:25021200-25032600 Weak transcription NHDF-Ad bronchial
7 chr20:25022200-25033000 Weak transcription Brain Germinal Matrix brain
8 chr20:25024000-25032400 Weak transcription Small Intestine intestine
9 chr20:25024200-25031200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
10 chr20:25024400-25032400 Strong transcription Fetal Intestine Small intestine
11 chr20:25024400-25032600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
12 chr20:25024400-25032600 Weak transcription Primary T helper naive cells from peripheral blood blood
13 chr20:25024400-25033000 Weak transcription Primary T killer memory cells from peripheral blood blood
14 chr20:25024600-25028000 Weak transcription Duodenum Smooth Muscle Duodenum
15 chr20:25024600-25028600 Strong transcription Colon Smooth Muscle Colon
16 chr20:25024600-25029000 Genic enhancers Pancreas Pancrea
17 chr20:25024600-25029200 Genic enhancers Fetal Muscle Trunk muscle
18 chr20:25024600-25031800 Weak transcription Primary T killer naive cells fromperipheralblood blood
19 chr20:25024600-25033200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
20 chr20:25024800-25028800 Strong transcription Fetal Stomach stomach
21 chr20:25025000-25027400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
22 chr20:25025200-25029200 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
23 chr20:25025400-25028400 Strong transcription Fetal Lung lung
24 chr20:25025400-25028800 Genic enhancers Lung lung
25 chr20:25025400-25028800 Genic enhancers Stomach Smooth Muscle stomach
26 chr20:25025400-25029000 Strong transcription Primary T helper 17 cells PMA-I stimulated --
27 chr20:25025400-25029600 Strong transcription Dnd41 blood
28 chr20:25025400-25030600 Strong transcription Primary mononuclear cells fromperipheralblood Blood
29 chr20:25025600-25027800 Bivalent Enhancer HepG2 liver
30 chr20:25025600-25029400 Strong transcription Primary T cells from cord blood blood
31 chr20:25025800-25027400 Weak transcription Rectal Mucosa Donor 31 rectum
32 chr20:25025800-25029000 Strong transcription Spleen Spleen
33 chr20:25026000-25028400 Strong transcription Breast Myoepithelial Primary Cells Breast
34 chr20:25026000-25028600 Strong transcription Primary T cells fromperipheralblood blood
35 chr20:25026000-25028800 Strong transcription Rectal Smooth Muscle rectum
36 chr20:25026000-25029000 Genic enhancers Skeletal Muscle Male skeletal muscle
37 chr20:25026000-25029200 Genic enhancers Brain Hippocampus Middle brain
38 chr20:25026000-25029400 Strong transcription Primary T regulatory cells fromperipheralblood blood
39 chr20:25026000-25030200 Enhancers Liver Liver
40 chr20:25026200-25027600 Enhancers Skeletal Muscle Female skeletal muscle
41 chr20:25026200-25028400 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
42 chr20:25026200-25029000 Strong transcription Rectal Mucosa Donor 29 rectum
43 chr20:25026200-25029400 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
44 chr20:25026200-25029600 Strong transcription Cortex derived primary cultured neurospheres brain
45 chr20:25026400-25027400 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
46 chr20:25026400-25027400 Strong transcription Fetal Muscle Leg muscle
47 chr20:25026400-25027600 Weak transcription Brain Angular Gyrus brain
48 chr20:25026400-25027600 Weak transcription Brain Inferior Temporal Lobe brain
49 chr20:25026400-25028400 Strong transcription Duodenum Mucosa Duodenum
50 chr20:25026400-25028800 Strong transcription Primary hematopoietic stem cells blood

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