Variant report

Variant rs61383964
Chromosome Location chr1:145525653-145525654
allele -/AA
Outlinks Ensembl   UCSC
Chromatin state (count:93 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:145517200-145528000 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr1:145517200-145533800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
3 chr1:145517400-145527400 Weak transcription ES-I3 Cell Line embryonic stem cell
4 chr1:145517400-145528600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
5 chr1:145517600-145527400 Weak transcription iPS-18 Cell Line embryonic stem cell
6 chr1:145519800-145527800 Weak transcription HUES64 Cell Line embryonic stem cell
7 chr1:145523600-145527400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
8 chr1:145523800-145527400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
9 chr1:145523800-145542200 Weak transcription Placenta Amnion Placenta Amnion
10 chr1:145524000-145527600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
11 chr1:145524000-145530200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
12 chr1:145524200-145525800 Weak transcription Primary hematopoietic stem cells blood
13 chr1:145524200-145526000 Weak transcription Primary monocytes fromperipheralblood blood
14 chr1:145524200-145526000 Weak transcription GM12878-XiMat blood
15 chr1:145524200-145526200 Weak transcription Dnd41 blood
16 chr1:145524200-145526800 Weak transcription Primary hematopoietic stem cells short term culture blood
17 chr1:145524200-145526800 Weak transcription Placenta Placenta
18 chr1:145524200-145528400 Weak transcription Fetal Brain Female brain
19 chr1:145524200-145531800 Weak transcription Rectal Mucosa Donor 29 rectum
20 chr1:145524200-145532000 Weak transcription Spleen Spleen
21 chr1:145524200-145532200 Weak transcription Esophagus oesophagus
22 chr1:145524200-145535400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
23 chr1:145524200-145535800 Weak transcription Primary T helper naive cells fromperipheralblood blood
24 chr1:145524200-145536000 Weak transcription Primary T cells from cord blood blood
25 chr1:145524200-145537200 Weak transcription Thymus Thymus
26 chr1:145524200-145537600 Weak transcription Primary B cells from cord blood blood
27 chr1:145524200-145541400 Weak transcription Pancreas Pancrea
28 chr1:145524200-145541800 Weak transcription Fetal Intestine Large intestine
29 chr1:145524200-145548600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
30 chr1:145524200-145548800 Weak transcription Gastric stomach
31 chr1:145524400-145526200 Weak transcription Primary T regulatory cells fromperipheralblood blood
32 chr1:145524400-145528000 Weak transcription Adipose Nuclei Adipose
33 chr1:145524400-145541800 Weak transcription Fetal Intestine Small intestine
34 chr1:145524800-145525800 Weak transcription Fetal Thymus thymus
35 chr1:145524800-145525800 Active TSS HSMM muscle
36 chr1:145524800-145526200 Active TSS Aorta Aorta
37 chr1:145524800-145527400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
38 chr1:145524800-145527800 Enhancers NHDF-Ad bronchial
39 chr1:145524800-145533800 Weak transcription Brain Germinal Matrix brain
40 chr1:145525000-145525800 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
41 chr1:145525000-145526000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
42 chr1:145525000-145526400 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
43 chr1:145525200-145525800 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
44 chr1:145525200-145525800 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
45 chr1:145525200-145525800 Weak transcription Lung lung
46 chr1:145525200-145526000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
47 chr1:145525200-145526000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
48 chr1:145525200-145526000 Strong transcription Fetal Stomach stomach
49 chr1:145525200-145526000 Weak transcription NHLF lung
50 chr1:145525200-145526200 Weak transcription Left Ventricle heart

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