Variant report

Variant	rs61387313
Chromosome Location	chr6:77018049-77018050
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 92 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:5)

rs_ID	r²[population]
rs56968446	1.00[AMR][1000 genomes]
rs9343438	1.00[AMR][1000 genomes]
rs9343440	1.00[AMR][1000 genomes]
rs9352324	1.00[AMR][1000 genomes]
rs9359197	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:87 , 50 per page) page: 1 2

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv932201	chr6:76365548-77219650	Enhancers Weak transcription Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	20 gene(s)	inside rSNPs	diseases
2	nsv1028764	chr6:76870971-77145573	Bivalent Enhancer Enhancers ZNF genes & repeats Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Active TSS	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
3	nsv886190	chr6:76978303-77021978	Active TSS ZNF genes & repeats Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
4	nsv886191	chr6:76978303-77052331	Enhancers Active TSS ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
5	nsv1025245	chr6:76998258-77024364	ZNF genes & repeats	n/a	n/a	inside rSNPs	diseases
6	nsv886192	chr6:76999513-77021978	ZNF genes & repeats	n/a	n/a	inside rSNPs	diseases
7	nsv886193	chr6:76999513-77031357	ZNF genes & repeats	n/a	n/a	inside rSNPs	diseases
8	nsv886194	chr6:76999513-77052331	Enhancers ZNF genes & repeats Active TSS	n/a	n/a	inside rSNPs	diseases
9	nsv886195	chr6:76999513-77097008	Enhancers Active TSS ZNF genes & repeats	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
10	esv1848720	chr6:76999513-77100253	Enhancers ZNF genes & repeats Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
11	nsv1030100	chr6:77002433-77027769	ZNF genes & repeats	n/a	n/a	inside rSNPs	diseases
12	esv1846195	chr6:77002472-77027966	ZNF genes & repeats	n/a	n/a	inside rSNPs	diseases
13	nsv1022664	chr6:77003172-77027769	ZNF genes & repeats	n/a	n/a	inside rSNPs	diseases
14	nsv5357	chr6:77010761-77034290	ZNF genes & repeats	n/a	n/a	inside rSNPs	diseases
15	nsv1018796	chr6:77013544-77024364	ZNF genes & repeats	n/a	n/a	inside rSNPs	diseases
16	nsv1016828	chr6:77013544-77024461	ZNF genes & repeats	n/a	n/a	inside rSNPs	diseases
17	esv1827848	chr6:77013544-77027769	ZNF genes & repeats	n/a	n/a	inside rSNPs	diseases
18	nsv1027580	chr6:77013544-77032941	ZNF genes & repeats	n/a	n/a	inside rSNPs	diseases
19	esv2761062	chr6:77013556-77027781	ZNF genes & repeats	n/a	n/a	inside rSNPs	diseases
20	esv1832421	chr6:77014509-77027769	ZNF genes & repeats	n/a	n/a	inside rSNPs	diseases
21	nsv1015544	chr6:77014509-77027769	ZNF genes & repeats	n/a	n/a	inside rSNPs	diseases
22	esv1830737	chr6:77014509-77027781	ZNF genes & repeats	n/a	n/a	inside rSNPs	diseases
23	nsv437511	chr6:77014509-77040270	Active TSS ZNF genes & repeats Enhancers	n/a	n/a	inside rSNPs	diseases
24	nsv1025415	chr6:77014948-77027769	ZNF genes & repeats	n/a	n/a	inside rSNPs	diseases
25	nsv886196	chr6:77015556-77031357	ZNF genes & repeats	n/a	n/a	inside rSNPs	diseases
26	esv1825130	chr6:77015826-77029061	ZNF genes & repeats	n/a	n/a	inside rSNPs	diseases
27	esv1843132	chr6:77015826-77029802	ZNF genes & repeats	n/a	n/a	inside rSNPs	diseases
28	esv1851178	chr6:77015924-77027694	ZNF genes & repeats	n/a	n/a	inside rSNPs	diseases
29	esv1825769	chr6:77015924-77030367	ZNF genes & repeats	n/a	n/a	inside rSNPs	diseases
30	nsv886197	chr6:77016346-77024665	ZNF genes & repeats	n/a	n/a	inside rSNPs	diseases
31	nsv517585	chr6:77016346-77031357	ZNF genes & repeats	n/a	n/a	inside rSNPs	diseases
32	nsv886198	chr6:77016346-77031357	ZNF genes & repeats	n/a	n/a	inside rSNPs	diseases
33	nsv886200	chr6:77016346-77035287	ZNF genes & repeats	n/a	n/a	inside rSNPs	diseases
34	nsv886199	chr6:77016346-77052331	Enhancers ZNF genes & repeats Active TSS	n/a	n/a	inside rSNPs	diseases
35	nsv886201	chr6:77016346-77097008	Enhancers ZNF genes & repeats Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
36	esv1831068	chr6:77016346-77100461	Active TSS Enhancers ZNF genes & repeats	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
37	esv3472857	chr6:77016538-77029275	ZNF genes & repeats	n/a	n/a	inside rSNPs	diseases
38	esv1844497	chr6:77016569-77027966	ZNF genes & repeats	n/a	n/a	inside rSNPs	diseases
39	esv3472855	chr6:77016585-77029252	ZNF genes & repeats	n/a	n/a	inside rSNPs	diseases
40	esv3472856	chr6:77016603-77029239	ZNF genes & repeats	n/a	n/a	inside rSNPs	diseases
41	esv3472854	chr6:77016610-77029189	ZNF genes & repeats	n/a	n/a	inside rSNPs	diseases
42	nsv7924	chr6:77016649-77029088	ZNF genes & repeats	n/a	n/a	inside rSNPs	diseases
43	esv1827916	chr6:77016651-77033718	ZNF genes & repeats	n/a	n/a	inside rSNPs	diseases
44	nsv823745	chr6:77016674-77028995	ZNF genes & repeats	n/a	n/a	inside rSNPs	diseases
45	nsv823746	chr6:77016674-77029122	ZNF genes & repeats	n/a	n/a	inside rSNPs	diseases
46	nsv499675	chr6:77016710-77029163	ZNF genes & repeats	n/a	n/a	inside rSNPs	diseases
47	esv3472858	chr6:77016711-77029163	ZNF genes & repeats	n/a	n/a	inside rSNPs	diseases
48	esv15734	chr6:77016724-77029130	ZNF genes & repeats	n/a	n/a	inside rSNPs	diseases
49	esv1825097	chr6:77016781-77029041	ZNF genes & repeats	n/a	n/a	inside rSNPs	diseases
50	esv1826364	chr6:77016781-77029041	ZNF genes & repeats	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:77018000-77018200	ZNF genes & repeats	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived

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