Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr4:96170637..96175521-chr4:96175696..96180371,8	K562	blood:

rSNPs within LD-proxies of this variant (count:9)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv869528	chr4:95537649-96368018	Weak transcription Enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Active TSS Strong transcription Genic enhancers Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	10 gene(s)	inside rSNPs	diseases
2	nsv879624	chr4:96147860-96183532	Weak transcription Enhancers Bivalent Enhancer Genic enhancers Active TSS ZNF genes & repeats Strong transcription Flanking Active TSS	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
3	nsv879625	chr4:96147860-96189813	Enhancers Flanking Active TSS Weak transcription Strong transcription Genic enhancers Active TSS ZNF genes & repeats Bivalent Enhancer	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:20 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:96153200-96189600	Weak transcription	Fetal Kidney	kidney
2	chr4:96171400-96184600	Weak transcription	Fetal Lung	lung
3	chr4:96171600-96181600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
4	chr4:96171800-96187600	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
5	chr4:96172000-96177800	Enhancers	Brain Hippocampus Middle	brain
6	chr4:96174800-96177800	Enhancers	Brain Cingulate Gyrus	brain
7	chr4:96176600-96177800	Flanking Active TSS	K562	blood
8	chr4:96176600-96178200	Enhancers	HUVEC	blood vessel
9	chr4:96176800-96177800	Enhancers	Muscle Satellite Cultured Cells	--
10	chr4:96177000-96177800	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
11	chr4:96177000-96184000	Weak transcription	Ovary	ovary
12	chr4:96177200-96177800	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
13	chr4:96177200-96177800	Enhancers	Brain Anterior Caudate	brain
14	chr4:96177400-96177800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
15	chr4:96177400-96177800	Enhancers	Brain Inferior Temporal Lobe	brain
16	chr4:96177400-96177800	Enhancers	Brain Substantia Nigra	brain
17	chr4:96177400-96177800	Enhancers	NH-A	brain
18	chr4:96177600-96177800	Enhancers	Osteobl	bone
19	chr4:96177600-96179200	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
20	chr4:96177600-96184600	Weak transcription	Brain Angular Gyrus	brain

Quick Search: