The 2.0 version of rSNPBase

Variant report

Variant rs61449207
Chromosome Location chr18:43536430-43536431
allele -/A/ATTT
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr18:43472000-43536800 Strong transcription Primary monocytes fromperipheralblood blood
2 chr18:43477800-43536800 Strong transcription Primary T cells from cord blood blood
3 chr18:43478000-43536600 Weak transcription ES-WA7 Cell Line embryonic stem cell
4 chr18:43492400-43546600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
5 chr18:43494000-43546600 Weak transcription Stomach Mucosa stomach
6 chr18:43514400-43537000 Strong transcription Primary B cells from cord blood blood
7 chr18:43519200-43546600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr18:43519800-43539400 Weak transcription A549 lung
9 chr18:43528600-43540000 Weak transcription iPS-15b Cell Line embryonic stem cell
10 chr18:43529000-43546400 Weak transcription ES-I3 Cell Line embryonic stem cell
11 chr18:43531200-43537000 Genic enhancers Osteobl bone
12 chr18:43534200-43537200 Strong transcription Breast Myoepithelial Primary Cells Breast
13 chr18:43534200-43545600 Weak transcription Fetal Brain Male brain
14 chr18:43534400-43537800 Genic enhancers HSMM muscle
15 chr18:43534400-43540800 Weak transcription Fetal Heart heart
16 chr18:43534600-43546600 Weak transcription Gastric stomach
17 chr18:43535000-43546400 Weak transcription Placenta Amnion Placenta Amnion
18 chr18:43535000-43546400 Weak transcription GM12878-XiMat blood
19 chr18:43535200-43536600 Genic enhancers Muscle Satellite Cultured Cells --
20 chr18:43535200-43536600 Weak transcription Skeletal Muscle Male skeletal muscle
21 chr18:43535200-43537000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
22 chr18:43535200-43537400 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
23 chr18:43535200-43537600 Weak transcription Ovary ovary
24 chr18:43535200-43538800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
25 chr18:43535200-43538800 Weak transcription Left Ventricle heart
26 chr18:43535200-43538800 Weak transcription Psoas Muscle Psoas
27 chr18:43535200-43539200 Weak transcription Pancreas Pancrea
28 chr18:43535200-43540200 Weak transcription Primary T killer naive cells fromperipheralblood blood
29 chr18:43535200-43540200 Weak transcription Primary T killer memory cells from peripheral blood blood
30 chr18:43535200-43540200 Weak transcription Thymus Thymus
31 chr18:43535200-43541000 Weak transcription Primary hematopoietic stem cells blood
32 chr18:43535200-43541000 Weak transcription Aorta Aorta
33 chr18:43535200-43541000 Weak transcription Esophagus oesophagus
34 chr18:43535200-43541000 Weak transcription Lung lung
35 chr18:43535200-43542000 Weak transcription H1 Cell Line embryonic stem cell
36 chr18:43535200-43542000 Weak transcription H9 Cell Line embryonic stem cell
37 chr18:43535200-43542000 Weak transcription Pancreatic Islets Pancreatic Islet
38 chr18:43535200-43542200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
39 chr18:43535200-43542400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
40 chr18:43535200-43542600 Weak transcription K562 blood
41 chr18:43535200-43543000 Weak transcription Right Ventricle heart
42 chr18:43535200-43543200 Weak transcription Duodenum Mucosa Duodenum
43 chr18:43535200-43545200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
44 chr18:43535200-43545200 Weak transcription Brain Hippocampus Middle brain
45 chr18:43535200-43545200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
46 chr18:43535200-43545400 Weak transcription Brain Angular Gyrus brain
47 chr18:43535200-43545600 Weak transcription Brain Germinal Matrix brain
48 chr18:43535200-43545600 Weak transcription Fetal Adrenal Gland Adrenal Gland
49 chr18:43535200-43545600 Weak transcription Small Intestine intestine
50 chr18:43535200-43546000 Weak transcription Fetal Intestine Small intestine

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Last update: Aug 31, 2015