Variant report

Variant rs61529650
Chromosome Location chr20:25025322-25025323
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:84 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr20:25012000-25026400 Enhancers Right Ventricle heart
2 chr20:25012800-25026400 Enhancers Brain Angular Gyrus brain
3 chr20:25014000-25026400 Enhancers Brain Cingulate Gyrus brain
4 chr20:25014200-25026400 Enhancers Brain Inferior Temporal Lobe brain
5 chr20:25014400-25025600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
6 chr20:25016400-25025800 Enhancers Fetal Heart heart
7 chr20:25016600-25025400 Enhancers Fetal Muscle Leg muscle
8 chr20:25016600-25027600 Enhancers Right Atrium heart
9 chr20:25016600-25034800 Weak transcription A549 lung
10 chr20:25017000-25026600 Enhancers Brain Anterior Caudate brain
11 chr20:25017400-25026400 Enhancers Brain Substantia Nigra brain
12 chr20:25017600-25026400 Enhancers Left Ventricle heart
13 chr20:25017800-25029000 Genic enhancers Placenta Placenta
14 chr20:25017800-25034200 Weak transcription Fetal Kidney kidney
15 chr20:25018600-25025600 Enhancers Liver Liver
16 chr20:25020200-25026400 Genic enhancers Fetal Adrenal Gland Adrenal Gland
17 chr20:25020600-25027000 Weak transcription Placenta Amnion Placenta Amnion
18 chr20:25020600-25037400 Enhancers Psoas Muscle Psoas
19 chr20:25021200-25025400 Weak transcription Fetal Brain Female brain
20 chr20:25021200-25027200 Enhancers Brain Dorsolateral Prefrontal Cortex brain
21 chr20:25021200-25032600 Weak transcription NHDF-Ad bronchial
22 chr20:25021400-25026400 Enhancers Adipose Nuclei Adipose
23 chr20:25022200-25027000 Weak transcription Ovary ovary
24 chr20:25022200-25033000 Weak transcription Brain Germinal Matrix brain
25 chr20:25022400-25026000 Enhancers Brain Hippocampus Middle brain
26 chr20:25022600-25025600 Enhancers Skeletal Muscle Female skeletal muscle
27 chr20:25022600-25026000 Weak transcription Rectal Smooth Muscle rectum
28 chr20:25022600-25026400 Enhancers Primary neutrophils fromperipheralblood blood
29 chr20:25023000-25025800 Enhancers Rectal Mucosa Donor 29 rectum
30 chr20:25023000-25026200 Enhancers Esophagus oesophagus
31 chr20:25023000-25026400 Enhancers Aorta Aorta
32 chr20:25023600-25026400 Enhancers Primary hematopoietic stem cells short term culture blood
33 chr20:25023600-25026600 Enhancers Primary B cells from cord blood blood
34 chr20:25023800-25025400 Enhancers Stomach Smooth Muscle stomach
35 chr20:25023800-25026800 Enhancers Primary B cells from peripheral blood blood
36 chr20:25023800-25027000 Weak transcription Sigmoid Colon Sigmoid Colon
37 chr20:25023800-25027200 Weak transcription Stomach Mucosa stomach
38 chr20:25024000-25025800 Weak transcription Breast Myoepithelial Primary Cells Breast
39 chr20:25024000-25026200 Genic enhancers Foreskin Melanocyte Primary Cells skin01 Skin
40 chr20:25024000-25032400 Weak transcription Small Intestine intestine
41 chr20:25024200-25025400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
42 chr20:25024200-25025400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
43 chr20:25024200-25025400 Weak transcription Gastric stomach
44 chr20:25024200-25025600 Weak transcription Primary T cells from cord blood blood
45 chr20:25024200-25025600 Strong transcription Cortex derived primary cultured neurospheres brain
46 chr20:25024200-25026000 Weak transcription Primary T regulatory cells fromperipheralblood blood
47 chr20:25024200-25026600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
48 chr20:25024200-25026800 Weak transcription Primary T helper cells PMA-I stimulated --
49 chr20:25024200-25026800 Weak transcription Thymus Thymus
50 chr20:25024200-25031200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell

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