Variant report

Variant	rs61546028
Chromosome Location	chr11:83533143-83533144
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs73515149	0.81[AFR][1000 genomes]
rs73515153	0.94[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv14634	chr11:83532806-83538775	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:83526800-83534600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
2	chr11:83527800-83539200	Weak transcription	Brain Angular Gyrus	brain
3	chr11:83529600-83534600	Weak transcription	NH-A	brain
4	chr11:83529800-83537800	Weak transcription	Muscle Satellite Cultured Cells	--
5	chr11:83530200-83534600	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
6	chr11:83531000-83534800	Weak transcription	Brain Hippocampus Middle	brain
7	chr11:83531000-83536800	Weak transcription	Brain Substantia Nigra	brain
8	chr11:83531600-83534800	Weak transcription	Brain Cingulate Gyrus	brain
9	chr11:83532200-83534600	Weak transcription	Brain Inferior Temporal Lobe	brain

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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