Variant report

Variant rs616390
Chromosome Location chr1:145024726-145024727
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:67 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:145015400-145030000 Weak transcription Placenta Amnion Placenta Amnion
2 chr1:145016800-145032600 Weak transcription Liver Liver
3 chr1:145016800-145032800 Weak transcription Spleen Spleen
4 chr1:145020600-145028000 Enhancers Brain Hippocampus Middle brain
5 chr1:145021000-145027800 Enhancers Brain Angular Gyrus brain
6 chr1:145021200-145026000 Enhancers Brain Inferior Temporal Lobe brain
7 chr1:145021200-145026800 Enhancers Psoas Muscle Psoas
8 chr1:145022000-145025600 Enhancers Fetal Brain Female brain
9 chr1:145022600-145025800 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
10 chr1:145022800-145026000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
11 chr1:145023000-145024800 Enhancers Fetal Brain Male brain
12 chr1:145023000-145026000 Genic enhancers HSMM muscle
13 chr1:145023200-145024800 Enhancers Fetal Heart heart
14 chr1:145023200-145025800 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
15 chr1:145023200-145025800 Enhancers HMEC breast
16 chr1:145023200-145026000 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
17 chr1:145023200-145026400 Enhancers Pancreatic Islets Pancreatic Islet
18 chr1:145023400-145025400 Enhancers Adipose Nuclei Adipose
19 chr1:145023400-145028000 Weak transcription Rectal Smooth Muscle rectum
20 chr1:145023600-145025200 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
21 chr1:145023600-145025400 Genic enhancers NHDF-Ad bronchial
22 chr1:145023600-145025800 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
23 chr1:145023600-145025800 Enhancers NHEK skin
24 chr1:145023600-145026000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
25 chr1:145023600-145027200 Enhancers Brain Germinal Matrix brain
26 chr1:145023600-145027600 Enhancers Brain Dorsolateral Prefrontal Cortex brain
27 chr1:145023600-145027800 Enhancers Brain Substantia Nigra brain
28 chr1:145023800-145026000 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
29 chr1:145023800-145026600 Weak transcription H9 Cell Line embryonic stem cell
30 chr1:145023800-145026600 Enhancers Osteobl bone
31 chr1:145023800-145027000 Enhancers Skeletal Muscle Female skeletal muscle
32 chr1:145023800-145027800 Enhancers Brain Cingulate Gyrus brain
33 chr1:145023800-145028000 Weak transcription iPS-15b Cell Line embryonic stem cell
34 chr1:145023800-145028000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
35 chr1:145023800-145032000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
36 chr1:145023800-145032800 Weak transcription Fetal Muscle Trunk muscle
37 chr1:145023800-145034000 Weak transcription Pancreas Pancrea
38 chr1:145024000-145024800 Enhancers Brain Anterior Caudate brain
39 chr1:145024000-145025000 Enhancers NH-A brain
40 chr1:145024000-145028000 Weak transcription Fetal Stomach stomach
41 chr1:145024400-145025200 Enhancers K562 blood
42 chr1:145024400-145025400 Flanking Active TSS Muscle Satellite Cultured Cells --
43 chr1:145024400-145025800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
44 chr1:145024400-145026200 Weak transcription HUES48 Cell Line embryonic stem cell
45 chr1:145024400-145026200 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
46 chr1:145024400-145026400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
47 chr1:145024400-145026400 Weak transcription Cortex derived primary cultured neurospheres brain
48 chr1:145024400-145026600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
49 chr1:145024400-145027400 Weak transcription iPS-18 Cell Line embryonic stem cell
50 chr1:145024400-145027400 Weak transcription iPS-20b Cell Line embryonic stem cell

Quick Search:


  
Input of quick search could be:

what's new

Quick links