Variant report

Variant	rs61742993
Chromosome Location	chr6:26204833-26204834
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:593)
CpG islands
(count:122)
Chromatin interactive
region (count:56)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:593 , 50 per page) page: 1 2 3 4 5 6 7 ... 12

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	HNF4A	chr6:26204565-26204946	HepG2	liver:	n/a	n/a
2	MEF2A	chr6:26204393-26205161	K562	blood:	n/a	n/a
3	ATF3	chr6:26204449-26205027	A549	lung:	n/a	chr6:26204704-26204717 chr6:26204707-26204715 chr6:26204705-26204716 chr6:26204706-26204717 chr6:26204705-26204718 chr6:26204707-26204717 chr6:26204706-26204714 chr6:26204705-26204716 chr6:26204703-26204714 chr6:26204707-26204714 chr6:26204704-26204714 chr6:26204703-26204718 chr6:26204704-26204717 chr6:26204707-26204718
4	POLR2A	chr6:26204448-26206415	ProgFib	skin:	n/a	n/a
5	SMC3	chr6:26204533-26205093	GM12878	blood:	n/a	n/a
6	POLR2A	chr6:26204527-26206485	Hela-S3	cervix:	n/a	n/a
7	ELF1	chr6:26204333-26205261	HepG2	liver:	n/a	n/a
8	EP300	chr6:26204486-26205077	T-47D	breast:	n/a	chr6:26204627-26204636
9	POLR2A	chr6:26204647-26206312	GM15510	blood:	n/a	n/a
10	POLR2A	chr6:26204440-26206771	GM12878	blood:	n/a	n/a
11	POLR2A	chr6:26204530-26206227	U87	brain:	n/a	n/a
12	POLR2A	chr6:26204619-26205829	GM12878	blood:	n/a	n/a
13	TAF1	chr6:26204672-26205139	PFSK-1	brain:	n/a	n/a
14	JUN	chr6:26204485-26205121	K562	blood:	n/a	chr6:26204705-26204718 chr6:26204706-26204715
15	HDAC2	chr6:26204593-26205194	HepG2	liver:	n/a	n/a
16	POLR2A	chr6:26204562-26206303	Hela-S3	cervix:	n/a	n/a
17	POLR2A	chr6:26204337-26206980	PANC-1	pancreas:	n/a	n/a
18	E2F6	chr6:26204815-26205149	K562	blood:	n/a	n/a
19	EP300	chr6:26204565-26205331	GM12878	blood:	n/a	chr6:26204627-26204636
20	NFIC	chr6:26204308-26206042	HepG2	liver:	n/a	n/a
21	POLR2A	chr6:26204477-26206766	GM12892	blood:	n/a	n/a
22	POLR2A	chr6:26203000-26208312	H1-hESC	embryonic stem cell:	n/a	n/a
23	CREB1	chr6:26204208-26206832	K562	blood:	n/a	chr6:26204704-26204717
24	POLR2A	chr6:26187684-26208312	K562	blood:	n/a	n/a
25	MAX	chr6:26204481-26205350	ECC-1	luminal epithelium:	n/a	n/a
26	GATA2	chr6:26204655-26205168	K562	blood:	n/a	chr6:26204941-26204955
27	POU2F2	chr6:26204564-26205308	GM12891	blood:	n/a	chr6:26204610-26204632
28	MEF2A	chr6:26204556-26205087	GM12878	blood:	n/a	n/a
29	POLR2A	chr6:26203926-26207116	K562	blood:	n/a	n/a
30	EP300	chr6:26204489-26205200	MCF-7	breast:	n/a	chr6:26204627-26204636
31	YY1	chr6:26204756-26205839	GM12892	blood:	n/a	n/a
32	TAF1	chr6:26204724-26205019	GM12892	blood:	n/a	n/a
33	HEY1	chr6:26204532-26206520	HepG2	liver:	n/a	chr6:26204707-26204716 chr6:26204705-26204714
34	ELK1	chr6:26204481-26205931	GM12878	blood:	n/a	n/a
35	JUND	chr6:26204549-26205031	HepG2	liver:	n/a	chr6:26204706-26204715
36	SIN3AK20	chr6:26204597-26205300	H1-hESC	embryonic stem cell:	n/a	n/a
37	MAFK	chr6:26204364-26206437	K562	blood:	n/a	n/a
38	MAX	chr6:26204254-26205299	MCF-7	breast:	n/a	n/a
39	USF1	chr6:26204542-26205301	K562	blood:	n/a	n/a
40	CEBPB	chr6:26204544-26205058	K562	blood:	n/a	n/a
41	POLR2A	chr6:26204449-26206755	HUVEC	blood vessel:	n/a	n/a
42	MXI1	chr6:26204510-26205645	H1-hESC	embryonic stem cell:	n/a	n/a
43	RELA	chr6:26204495-26206086	GM15510	blood:	n/a	n/a
44	NFIC	chr6:26204341-26206624	SK-N-SH	brain:	n/a	n/a
45	SIX5	chr6:26204622-26204871	A549	lung:	n/a	n/a
46	POLR2A	chr6:26204469-26205854	MCF-7	breast:	n/a	n/a
47	YY1	chr6:26204461-26206517	SK-N-SH_RA	brain:	n/a	n/a
48	POLR2A	chr6:26204397-26206546	U87	brain:	n/a	n/a
49	STAT3	chr6:26204573-26205839	MCF10A-Er-Src	breast:	n/a	chr6:26204798-26204809
50	EP300	chr6:26204322-26205329	SK-N-SH	brain:	n/a	chr6:26204627-26204636

(count:122 , 50 per page) page: 1 2 3

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr6:26204823-26204873	NH-A	brain:	n/a
2	chr6:26204823-26204873	U87	brain:	n/a
3	chr6:26204796-26204846	NB4	blood:	n/a
4	chr6:26204796-26204846	HRPEpiC	eye:	n/a
5	chr6:26204796-26204846	HL-60	blood:	n/a
6	chr6:26204796-26204846	NT2-D1	testis:	n/a
7	chr6:26204823-26204873	PrEC	prostate:	n/a
8	chr6:26204823-26204873	IMR90	lung:	fetal
9	chr6:26204796-26204846	Jurkat	blood:	n/a
10	chr6:26204823-26204873	HCM	heart:	n/a
11	chr6:26204796-26204846	T-47D	breast:	n/a
12	chr6:26204823-26204873	SK-N-MC	brain:	n/a
13	chr6:26204823-26204873	T-47D	breast:	n/a
14	chr6:26204796-26204846	HCT-116	colon:	n/a
15	chr6:26204823-26204873	LNCaP	prostate:	n/a
16	chr6:26204823-26204873	PFSK-1	brain:	n/a
17	chr6:26204823-26204873	HIPEpiC	eye:	n/a
18	chr6:26204823-26204873	AG04449	skin:	fetal
19	chr6:26204796-26204846	SK-N-SH_RA	brain:	n/a
20	chr6:26204796-26204846	AG04449	skin:	fetal
21	chr6:26204796-26204846	BJ	skin:	n/a
22	chr6:26204796-26204846	MCF10A-Er-Src	breast:	n/a
23	chr6:26204796-26204846	AG09309	skin:	n/a
24	chr6:26204796-26204846	HNPCEpiC	eye:	n/a
25	chr6:26204796-26204846	AoSMC	blood vessel:	n/a
26	chr6:26204796-26204846	GM19239	blood:	n/a
27	chr6:26204823-26204873	MCF-7	breast:	n/a
28	chr6:26204823-26204873	SKMC	muscle:	n/a
29	chr6:26204796-26204846	HEEpiC	esophagus:	n/a
30	chr6:26204796-26204846	U87	brain:	n/a
31	chr6:26204823-26204873	Jurkat	blood:	n/a
32	chr6:26204823-26204873	SAEC	small airway:	n/a
33	chr6:26204796-26204846	GM06990	blood:	n/a
34	chr6:26204796-26204846	HMEC	breast:	n/a
35	chr6:26204796-26204846	Hela-S3	cervix:	n/a
36	chr6:26204823-26204873	HNPCEpiC	eye:	n/a
37	chr6:26204796-26204846	GM12892	blood:	n/a
38	chr6:26204823-26204873	Caco-2	colon:	n/a
39	chr6:26204796-26204846	NHBE	bronchial:	n/a
40	chr6:26204796-26204846	HEK293	kidney:	embryo
41	chr6:26204823-26204873	HUVEC	blood vessel:	n/a
42	chr6:26204796-26204846	Hepatocyte	liver:	n/a
43	chr6:26204823-26204873	Hepatocyte	liver:	n/a
44	chr6:26204796-26204846	AG04450	lung:	fetal
45	chr6:26204796-26204846	BE2_C	brain:	n/a
46	chr6:26204823-26204873	AG10803	skin:	n/a
47	chr6:26204823-26204873	HCF	heart:	n/a
48	chr6:26204796-26204846	HRCEpiC	kidney:	n/a
49	chr6:26204823-26204873	SK-N-SH	brain:	n/a
50	chr6:26204796-26204846	GM12891	blood:	n/a

(count:56 , 50 per page) page: 1 2

No.	Distal block	Cell Line	Cell type
1	chr6:26203350..26205090-chr6:27099738..27102062,2	MCF-7	breast:
2	chr6:26204334..26206803-chr8:99304596..99307549,2	MCF-7	breast:
3	chr15:66678789..66679511-chr6:26204403..26205285,2	Hela-S3	cervix:
4	chr6:26203848..26208105-chr6:27113189..27116345,6	MCF-7	breast:
5	chr11:62608806..62609617-chr6:26204391..26205134,2	HCT-116	colon:
6	chr12:57479708..57482398-chr6:26204786..26207325,2	MCF-7	breast:
7	chr6:26204801..26205461-chr9:130213156..130213708,2	Hela-S3	cervix:
8	chr6:26026421..26028789-chr6:26203336..26205903,2	MCF-7	breast:
9	chr11:14912898..14913658-chr6:26204730..26205330,2	HCT-116	colon:
10	chr15:74988155..74989009-chr6:26204371..26204932,2	Hela-S3	cervix:
11	chr6:26019231..26022068-chr6:26204049..26206272,3	MCF-7	breast:
12	chr6:26201617..26205446-chr6:27775076..27778001,4	K562	blood:
13	chr5:140998035..140998908-chr6:26204442..26205326,2	Hela-S3	cervix:
14	chr6:26204453..26205159-chr6:30034223..30034802,2	Hela-S3	cervix:
15	chr6:16238757..16240656-chr6:26203889..26205752,2	K562	blood:
16	chr21:43784816..43787637-chr6:26203618..26206285,2	MCF-7	breast:
17	chr6:26196890..26209578-chr6:27096615..27108451,46	K562	blood:
18	chr11:63951584..63953989-chr6:26204778..26206338,2	MCF-7	breast:
19	chr6:26202461..26206307-chr6:27111685..27116147,8	K562	blood:
20	chr6:26203030..26208239-chr6:27858574..27863151,12	MCF-7	breast:
21	chr10:3827203..3828012-chr6:26204566..26205281,2	NB4	blood:
22	chr6:26204417..26205145-chrX:11129192..11129872,2	Hela-S3	cervix:
23	chr20:52824540..52826280-chr6:26204006..26206221,2	MCF-7	breast:
24	chr1:25573431..25574212-chr6:26204345..26205221,2	Hela-S3	cervix:
25	chr20:18486697..18489391-chr6:26203870..26205427,2	MCF-7	breast:
26	chr5:52405264..52406002-chr6:26204662..26205210,2	HCT-116	colon:
27	chr2:238394029..238396506-chr6:26203344..26206529,3	MCF-7	breast:
28	chr6:26195729..26208268-chr6:27092660..27105612,50	K562	blood:
29	chr17:41463769..41466376-chr6:26204076..26206322,2	K562	blood:
30	chr6:26203843..26208171-chr6:27113293..27116172,4	MCF-7	breast:
31	chr6:26204316..26204929-chr8:144416563..144417284,2	Hela-S3	cervix:
32	chr1:149856931..149859975-chr6:26202139..26205611,5	MCF-7	breast:
33	chr6:26202344..26207712-chr6:27112121..27116672,11	K562	blood:
34	chr6:26203687..26207464-chr6:26521178..26524047,5	K562	blood:
35	chr6:26200995..26208208-chr6:27098278..27102268,10	MCF-7	breast:
36	chr6:26204792..26206368-chr6:27774871..27776678,2	MCF-7	breast:
37	chr17:73775441..73775999-chr6:26204753..26205644,2	Hela-S3	cervix:
38	chr17:63051178..63053985-chr6:26202995..26205801,2	MCF-7	breast:
39	chr6:26204311..26207640-chr6:27105695..27109383,4	K562	blood:
40	chr6:26204659..26205272-chr8:145581837..145582534,2	HCT-116	colon:
41	chr3:169481992..169483255-chr6:26204706..26205565,3	Hela-S3	cervix:
42	chr6:26201927..26205994-chr6:27859683..27862837,3	K562	blood:
43	chr6:26203034..26206484-chr6:27789284..27793104,6	MCF-7	breast:
44	chr6:26204681..26207115-chr6:27805289..27807793,3	MCF-7	breast:
45	chr17:46986206..46986991-chr6:26204806..26205624,2	Hela-S3	cervix:
46	chr20:52772678..52774287-chr6:26204337..26206417,2	MCF-7	breast:
47	chr6:26203418..26208290-chr6:27773529..27778557,7	MCF-7	breast:
48	chr6:26204708..26206864-chr8:101732087..101734404,2	MCF-7	breast:
49	chr13:28024150..28024797-chr6:26204760..26205612,2	HCT-116	colon:
50	chr5:89703591..89705335-chr6:26204580..26206448,2	K562	blood:

No data

Variant related genes	Relation type
HIST1H4E	TF binding region
HIST1H4E	CpG island
ENSG00000203813	Chromatin interaction
ENSG00000117616	Chromatin interaction
ENSG00000169032	Chromatin interaction
ENSG00000132475	Chromatin interaction
ENSG00000179151	Chromatin interaction
ENSG00000185130	Chromatin interaction
ENSG00000133316	Chromatin interaction
ENSG00000120738	Chromatin interaction
ENSG00000185803	Chromatin interaction
ENSG00000197238	Chromatin interaction
ENSG00000248278	Chromatin interaction
ENSG00000137198	Chromatin interaction
ENSG00000168439	Chromatin interaction
ENSG00000178096	Chromatin interaction
ENSG00000265565	Chromatin interaction
ENSG00000101310	Chromatin interaction
ENSG00000186104	Chromatin interaction
ENSG00000164172	Chromatin interaction
ENSG00000101132	Chromatin interaction
ENSG00000124693	Chromatin interaction
ENSG00000137259	Chromatin interaction
ENSG00000153140	Chromatin interaction
ENSG00000182325	Chromatin interaction
ENSG00000196747	Chromatin interaction
ENSG00000158406	Chromatin interaction
ENSG00000196331	Chromatin interaction
ENSG00000124529	Chromatin interaction
ENSG00000075131	Chromatin interaction
ENSG00000234129	Chromatin interaction
ENSG00000067082	Chromatin interaction
ENSG00000160182	Chromatin interaction
ENSG00000204619	Chromatin interaction
ENSG00000115648	Chromatin interaction
ENSG00000228223	Chromatin interaction
ENSG00000184260	Chromatin interaction
ENSG00000247796	Chromatin interaction
ENSG00000233822	Chromatin interaction
ENSG00000197153	Chromatin interaction
ENSG00000120063	Chromatin interaction
ENSG00000184428	Chromatin interaction
ENSG00000019186	Chromatin interaction
ENSG00000233224	Chromatin interaction
ENSG00000196787	Chromatin interaction
ENSG00000196176	Chromatin interaction
ENSG00000217862	Chromatin interaction
ENSG00000124635	Chromatin interaction
ENSG00000122033	Chromatin interaction
ENSG00000184270	Chromatin interaction
ENSG00000166881	Chromatin interaction
ENSG00000184825	Chromatin interaction
ENSG00000184348	Chromatin interaction
ENSG00000270141	Chromatin interaction
ENSG00000198366	Chromatin interaction
ENSG00000070756	Chromatin interaction
ENSG00000198339	Chromatin interaction
ENSG00000197903	Chromatin interaction
ENSG00000104361	Chromatin interaction
ENSG00000188825	Chromatin interaction
ENSG00000184678	Chromatin interaction
ENSG00000197958	Chromatin interaction
ENSG00000131504	Chromatin interaction
ENSG00000004961	Chromatin interaction

Extended variants
information (count: 26 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:6)

rs_ID	r²[population]
rs61742995	1.00[EUR][1000 genomes]
rs61746493	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs61978632	1.00[EUR][1000 genomes]
rs6918027	1.00[EUR][1000 genomes]
rs73736572	1.00[EUR][1000 genomes]
rs7750868	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:20 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1029920	chr6:25638507-26585842	Bivalent/Poised TSS Flanking Active TSS ZNF genes & repeats Enhancers Weak transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Active TSS Genic enhancers Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	1215 gene(s)	inside rSNPs	diseases
2	nsv538162	chr6:25638507-26585842	Flanking Active TSS Active TSS ZNF genes & repeats Genic enhancers Weak transcription Strong transcription Enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	1215 gene(s)	inside rSNPs	diseases
3	nsv1030351	chr6:25813178-26352046	Enhancers Active TSS Weak transcription Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Strong transcription ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	1189 gene(s)	inside rSNPs	diseases
4	nsv1023453	chr6:25853830-26528250	Weak transcription Flanking Active TSS Enhancers Active TSS Bivalent/Poised TSS Strong transcription Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	1201 gene(s)	inside rSNPs	diseases
5	nsv1025237	chr6:25874326-26280867	Flanking Active TSS Active TSS Enhancers Weak transcription Bivalent/Poised TSS Strong transcription Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	1166 gene(s)	inside rSNPs	diseases
6	nsv538163	chr6:25874326-26280867	Enhancers Flanking Active TSS Strong transcription Active TSS Weak transcription Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	1166 gene(s)	inside rSNPs	diseases
7	nsv428137	chr6:25987413-26351920	Enhancers Flanking Active TSS Active TSS Weak transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	1181 gene(s)	inside rSNPs	diseases
8	nsv916992	chr6:25991630-26280921	Active TSS Weak transcription Enhancers Flanking Active TSS Genic enhancers Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	1159 gene(s)	inside rSNPs	diseases
9	nsv1028232	chr6:26005449-26319756	Flanking Active TSS Genic enhancers Active TSS Bivalent/Poised TSS Weak transcription Enhancers Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	1171 gene(s)	inside rSNPs	diseases
10	nsv870314	chr6:26008435-26280807	Flanking Active TSS Enhancers Active TSS Genic enhancers Weak transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	1151 gene(s)	inside rSNPs	diseases
11	nsv1023457	chr6:26014014-26305407	Active TSS Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	1170 gene(s)	inside rSNPs	diseases
12	nsv1025493	chr6:26026870-26223838	Weak transcription Enhancers Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Strong transcription Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	1001 gene(s)	inside rSNPs	diseases
13	nsv1023979	chr6:26026870-26287399	Flanking Active TSS Enhancers Bivalent/Poised TSS Active TSS Weak transcription Transcr. at gene 5' and 3' Strong transcription Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	1113 gene(s)	inside rSNPs	diseases
14	nsv1015782	chr6:26026870-26323895	Active TSS Weak transcription Flanking Active TSS Enhancers Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	1114 gene(s)	inside rSNPs	diseases
15	nsv1018665	chr6:26026870-26352046	Flanking Active TSS Weak transcription Active TSS Enhancers Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	1116 gene(s)	inside rSNPs	diseases
16	nsv482348	chr6:26082709-26261136	Enhancers Flanking Active TSS Active TSS Weak transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS Strong transcription Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	799 gene(s)	inside rSNPs	diseases
17	nsv518431	chr6:26148311-26211368	Active TSS Flanking Active TSS Weak transcription Enhancers Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Strong transcription Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	521 gene(s)	inside rSNPs	diseases
18	nsv526456	chr6:26148311-26211368	Active TSS Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	521 gene(s)	inside rSNPs	diseases
19	nsv883490	chr6:26172219-26231608	Enhancers Flanking Active TSS Active TSS Weak transcription ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	316 gene(s)	inside rSNPs	diseases
20	nsv1021294	chr6:26190316-26246784	Active TSS Flanking Active TSS Enhancers Weak transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats Strong transcription Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	309 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:127 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:26203400-26206400	Active TSS	HUES6 Cell Line	embryonic stem cell
2	chr6:26203400-26207200	Active TSS	ES-I3 Cell Line	embryonic stem cell
3	chr6:26203400-26207600	Active TSS	Thymus	Thymus
4	chr6:26203400-26207800	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
5	chr6:26203600-26205200	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
6	chr6:26203600-26206400	Active TSS	K562	blood
7	chr6:26203600-26207000	Active TSS	H9 Cell Line	embryonic stem cell
8	chr6:26203800-26205000	Active TSS	Brain Germinal Matrix	brain
9	chr6:26203800-26207000	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
10	chr6:26203800-26207000	Active TSS	iPS-18 Cell Line	embryonic stem cell
11	chr6:26203800-26207000	Active TSS	Fetal Kidney	kidney
12	chr6:26203800-26207200	Active TSS	HUES48 Cell Line	embryonic stem cell
13	chr6:26203800-26207200	Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
14	chr6:26203800-26207600	Active TSS	H1 Cell Line	embryonic stem cell
15	chr6:26203800-26207600	Active TSS	HUES64 Cell Line	embryonic stem cell
16	chr6:26204000-26205000	Active TSS	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
17	chr6:26204000-26205800	Active TSS	Foreskin Melanocyte Primary Cells skin03	Skin
18	chr6:26204000-26205800	Active TSS	Osteobl	bone
19	chr6:26204000-26206600	Active TSS	Brain Angular Gyrus	brain
20	chr6:26204000-26206600	Active TSS	Colon Smooth Muscle	Colon
21	chr6:26204000-26206600	Bivalent/Poised TSS	Psoas Muscle	Psoas
22	chr6:26204000-26206800	Active TSS	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
23	chr6:26204000-26206800	Active TSS	iPS DF 6.9 Cell Line	embryonic stem cell
24	chr6:26204000-26206800	Active TSS	iPS DF 19.11 Cell Line	embryonic stem cell
25	chr6:26204000-26206800	Active TSS	ES-UCSF4 Cell Line	embryonic stem cell
26	chr6:26204000-26206800	Active TSS	Right Ventricle	heart
27	chr6:26204000-26206800	Bivalent/Poised TSS	Stomach Smooth Muscle	stomach
28	chr6:26204000-26207000	Active TSS	IMR90 fetal lung fibroblasts Cell Line	lung
29	chr6:26204000-26207000	Active TSS	iPS-15b Cell Line	embryonic stem cell
30	chr6:26204000-26207200	Active TSS	iPS-20b Cell Line	embryonic stem cell
31	chr6:26204000-26207200	Active TSS	Brain Inferior Temporal Lobe	brain
32	chr6:26204000-26207200	Active TSS	Rectal Mucosa Donor 29	rectum
33	chr6:26204000-26207200	Active TSS	NH-A	brain
34	chr6:26204000-26207800	Active TSS	Brain Anterior Caudate	brain
35	chr6:26204200-26205000	Flanking Active TSS	Primary T helper cells PMA-I stimulated	--
36	chr6:26204200-26205200	Flanking Active TSS	Primary T regulatory cells fromperipheralblood	blood
37	chr6:26204200-26205400	Flanking Active TSS	Primary mononuclear cells fromperipheralblood	Blood
38	chr6:26204200-26205800	Active TSS	NHEK	skin
39	chr6:26204200-26206000	Active TSS	Fetal Heart	heart
40	chr6:26204200-26206000	Active TSS	Placenta Amnion	Placenta Amnion
41	chr6:26204200-26206000	Transcr. at gene 5' and 3'	Right Atrium	heart
42	chr6:26204200-26206200	Active TSS	Rectal Mucosa Donor 31	rectum
43	chr6:26204200-26206400	Active TSS	Esophagus	oesophagus
44	chr6:26204200-26206400	Active TSS	HSMM	muscle
45	chr6:26204200-26206600	Active TSS	ES-WA7 Cell Line	embryonic stem cell
46	chr6:26204200-26206600	Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
47	chr6:26204200-26206600	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
48	chr6:26204200-26206600	Active TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
49	chr6:26204200-26206600	Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
50	chr6:26204200-26206600	Active TSS	Fetal Intestine Small	intestine

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