Variant report

Variant	rs61745651
Chromosome Location	chr14:64988786-64988787
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr14:64988143..64990019-chr14:65005055..65006993,2	MCF-7	breast:
2	chr14:64986499..64988799-chr14:64989705..64991452,2	MCF-7	breast:
3	chr14:64972191..64974986-chr14:64988003..64989901,3	MCF-7	breast:
4	chr14:64981930..64983904-chr14:64987033..64989897,3	MCF-7	breast:
5	chr14:64987035..64989680-chr14:64995490..64997427,2	MCF-7	breast:

Extended variants
information (count: 2 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs45625140	0.90[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv521823	chr14:64969342-64995694	Enhancers Weak transcription Active TSS Flanking Active TSS Genic enhancers Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	56 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:117 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:64972800-64991600	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
2	chr14:64974800-64999400	Weak transcription	Fetal Brain Male	brain
3	chr14:64974800-65006000	Weak transcription	Ovary	ovary
4	chr14:64976000-64995400	Weak transcription	Gastric	stomach
5	chr14:64976000-64996600	Weak transcription	Esophagus	oesophagus
6	chr14:64976000-65006000	Weak transcription	Brain Germinal Matrix	brain
7	chr14:64976200-64991800	Weak transcription	Stomach Mucosa	stomach
8	chr14:64977800-64991600	Weak transcription	Placenta Amnion	Placenta Amnion
9	chr14:64977800-64992200	Weak transcription	Colonic Mucosa	Colon
10	chr14:64977800-64993600	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
11	chr14:64978200-64989400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
12	chr14:64978200-65006000	Weak transcription	Brain Cingulate Gyrus	brain
13	chr14:64978400-64992200	Weak transcription	Brain Inferior Temporal Lobe	brain
14	chr14:64978400-64992600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
15	chr14:64978600-64996200	Weak transcription	Brain Angular Gyrus	brain
16	chr14:64979200-64988800	Weak transcription	Spleen	Spleen
17	chr14:64979200-65005800	Weak transcription	Brain Anterior Caudate	brain
18	chr14:64981800-64989000	Weak transcription	Brain Substantia Nigra	brain
19	chr14:64982000-64989400	Weak transcription	Aorta	Aorta
20	chr14:64982000-65005800	Weak transcription	Fetal Heart	heart
21	chr14:64983400-64993000	Weak transcription	Psoas Muscle	Psoas
22	chr14:64984000-64988800	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
23	chr14:64984200-64989000	Weak transcription	Colon Smooth Muscle	Colon
24	chr14:64984800-64996200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
25	chr14:64985000-64991000	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
26	chr14:64985400-64990000	Weak transcription	Pancreatic Islets	Pancreatic Islet
27	chr14:64987000-64990400	Strong transcription	Primary T helper naive cells fromperipheralblood	blood
28	chr14:64987000-64993800	Strong transcription	Dnd41	blood
29	chr14:64987400-64993600	Strong transcription	Monocytes-CD14+_RO01746	blood
30	chr14:64987600-64990200	Strong transcription	Primary mononuclear cells fromperipheralblood	Blood
31	chr14:64987600-64990400	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
32	chr14:64987600-64990400	Genic enhancers	Primary T helper memory cells from peripheral blood 2	blood
33	chr14:64987600-64990400	Strong transcription	Thymus	Thymus
34	chr14:64987600-64990400	Strong transcription	GM12878-XiMat	blood
35	chr14:64987600-64990400	Strong transcription	NHEK	skin
36	chr14:64987600-64990600	Strong transcription	Rectal Mucosa Donor 31	rectum
37	chr14:64987600-64993800	Strong transcription	Fetal Thymus	thymus
38	chr14:64987800-64990400	Strong transcription	HUES64 Cell Line	embryonic stem cell
39	chr14:64987800-64990400	Strong transcription	Fetal Muscle Trunk	muscle
40	chr14:64987800-64993600	Strong transcription	Osteobl	bone
41	chr14:64987800-64993800	Strong transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
42	chr14:64987800-65005000	Weak transcription	Pancreas	Pancrea
43	chr14:64988000-64989000	Strong transcription	Primary T helper cells PMA-I stimulated	--
44	chr14:64988000-64990600	Strong transcription	Hela-S3	cervix
45	chr14:64988000-64992600	Weak transcription	Fetal Intestine Small	intestine
46	chr14:64988200-64988800	Strong transcription	Right Ventricle	heart
47	chr14:64988200-64989800	Strong transcription	Placenta	Placenta
48	chr14:64988200-64990000	Strong transcription	Brain Hippocampus Middle	brain
49	chr14:64988200-64990200	Strong transcription	H1 Cell Line	embryonic stem cell
50	chr14:64988200-64990200	Strong transcription	IMR90 fetal lung fibroblasts Cell Line	lung

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