Variant report

Variant	rs61784314
Chromosome Location	chr1:70584169-70584170
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:70579819..70586135-chr1:70587116..70591228,8	K562	blood:

Variant related genes	Relation type
ENSG00000033122	Chromatin interaction

Extended variants
information (count: 32 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:31)

rs_ID	r²[population]
rs10493472	0.98[AFR][1000 genomes];0.97[ASN][1000 genomes]
rs11799572	0.98[AFR][1000 genomes];0.98[ASN][1000 genomes]
rs11810684	0.97[AFR][1000 genomes];0.98[ASN][1000 genomes]
rs11810719	0.98[AFR][1000 genomes];0.98[ASN][1000 genomes]
rs11810721	0.98[AFR][1000 genomes];0.98[ASN][1000 genomes]
rs17131204	0.89[AFR][1000 genomes];0.98[ASN][1000 genomes]
rs17131207	0.97[ASN][1000 genomes]
rs17131208	0.98[AFR][1000 genomes];0.98[ASN][1000 genomes]
rs17131209	0.98[AFR][1000 genomes];0.95[ASN][1000 genomes]
rs17131212	0.97[ASN][1000 genomes]
rs17131214	0.97[ASN][1000 genomes]
rs17131215	0.98[AFR][1000 genomes];0.98[ASN][1000 genomes]
rs17131217	0.97[ASN][1000 genomes]
rs17131218	0.98[AFR][1000 genomes];0.97[ASN][1000 genomes]
rs17131219	0.98[AFR][1000 genomes];0.98[ASN][1000 genomes]
rs17131220	0.93[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs2220958	0.98[AFR][1000 genomes];0.98[ASN][1000 genomes]
rs3738119	0.97[ASN][1000 genomes]
rs4650027	0.94[AFR][1000 genomes];0.98[ASN][1000 genomes]
rs4650028	0.98[AFR][1000 genomes];0.98[ASN][1000 genomes]
rs55992448	0.93[AFR][1000 genomes];0.98[ASN][1000 genomes]
rs56013720	0.93[AFR][1000 genomes];0.92[ASN][1000 genomes]
rs56108385	0.90[AFR][1000 genomes];0.98[ASN][1000 genomes]
rs56194840	0.93[AFR][1000 genomes];0.98[ASN][1000 genomes]
rs57977150	0.98[AFR][1000 genomes];0.98[ASN][1000 genomes]
rs61784297	0.97[ASN][1000 genomes]
rs61784310	0.98[AFR][1000 genomes];0.98[ASN][1000 genomes]
rs61784313	0.98[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs74085938	0.96[AFR][1000 genomes];0.88[ASN][1000 genomes]
rs74085939	0.98[AFR][1000 genomes];0.92[ASN][1000 genomes]
rs7521532	0.98[AFR][1000 genomes];0.98[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv531879	chr1:70386455-70644617	Enhancers Weak transcription Strong transcription Active TSS ZNF genes & repeats Flanking Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:70557000-70599600	Weak transcription	Fetal Brain Female	brain
2	chr1:70583800-70599600	Weak transcription	Fetal Heart	heart

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