Variant report

Variant	rs61794120
Chromosome Location	chr4:30328274-30328275
allele	A/C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs11934019	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11938905	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11943105	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs57819094	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73809649	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73809675	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73810930	1.00[EUR][1000 genomes]
rs73811154	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73811164	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73811167	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv878804	chr4:30162762-30412195	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:30327800-30332600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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