The 2.0 version of rSNPBase

Variant report

Variant rs61798702
Chromosome Location chr1:67021487-67021488
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:44 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:67000400-67022000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr1:67000800-67029800 Weak transcription Primary hematopoietic stem cells blood
3 chr1:67001200-67022000 Weak transcription Right Ventricle heart
4 chr1:67007000-67021800 Weak transcription H9 Cell Line embryonic stem cell
5 chr1:67009800-67028200 Weak transcription Brain Germinal Matrix brain
6 chr1:67010000-67029000 Weak transcription Fetal Kidney kidney
7 chr1:67011000-67028000 Weak transcription HUVEC blood vessel
8 chr1:67011200-67021800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
9 chr1:67011200-67022000 Weak transcription Pancreas Pancrea
10 chr1:67011800-67029800 Weak transcription Fetal Brain Male brain
11 chr1:67015800-67021600 Weak transcription Brain Anterior Caudate brain
12 chr1:67017400-67023800 Enhancers Fetal Heart heart
13 chr1:67017800-67022400 Genic enhancers Foreskin Fibroblast Primary Cells skin01 Skin
14 chr1:67018000-67023800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
15 chr1:67018200-67023800 Enhancers Brain Angular Gyrus brain
16 chr1:67018400-67022000 Weak transcription NH-A brain
17 chr1:67018800-67022000 Weak transcription Aorta Aorta
18 chr1:67018800-67022000 Weak transcription Fetal Muscle Leg muscle
19 chr1:67018800-67022000 Weak transcription Left Ventricle heart
20 chr1:67019000-67021800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
21 chr1:67019000-67022000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
22 chr1:67019000-67023600 Weak transcription iPS-18 Cell Line embryonic stem cell
23 chr1:67019000-67028600 Weak transcription iPS-20b Cell Line embryonic stem cell
24 chr1:67019200-67021800 Weak transcription Fetal Thymus thymus
25 chr1:67019200-67023200 Weak transcription Fetal Lung lung
26 chr1:67019800-67024000 Enhancers NHDF-Ad bronchial
27 chr1:67020000-67022200 Weak transcription Muscle Satellite Cultured Cells --
28 chr1:67020200-67021600 Weak transcription NHEK skin
29 chr1:67020200-67021800 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
30 chr1:67020200-67021800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
31 chr1:67020200-67021800 Weak transcription NHLF lung
32 chr1:67020200-67022000 Weak transcription Osteobl bone
33 chr1:67020200-67028200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
34 chr1:67021000-67024000 Enhancers Breast Myoepithelial Primary Cells Breast
35 chr1:67021200-67022200 Enhancers Brain Inferior Temporal Lobe brain
36 chr1:67021200-67022400 Genic enhancers Foreskin Fibroblast Primary Cells skin02 Skin
37 chr1:67021200-67022600 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
38 chr1:67021200-67023400 Enhancers Brain Substantia Nigra brain
39 chr1:67021400-67022400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
40 chr1:67021400-67022400 Enhancers Brain Dorsolateral Prefrontal Cortex brain
41 chr1:67021400-67022800 Enhancers HMEC breast
42 chr1:67021400-67023400 Enhancers Cortex derived primary cultured neurospheres brain
43 chr1:67021400-67023800 Enhancers Brain Hippocampus Middle brain
44 chr1:67021400-67024000 Enhancers Brain Cingulate Gyrus brain

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Last update: Aug 31, 2015