Variant report
| Variant | rs61800 |
|---|---|
| Chromosome Location | chr12:29879301-29879302 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:29855800-29891200 | Weak transcription | NHLF | lung |
| 2 | chr12:29863400-29895800 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 3 | chr12:29864200-29879400 | Weak transcription | Right Atrium | heart |
| 4 | chr12:29867800-29881200 | Weak transcription | Small Intestine | intestine |
| 5 | chr12:29868000-29885000 | Weak transcription | HMEC | breast |
| 6 | chr12:29868600-29885600 | Weak transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 7 | chr12:29872600-29884000 | Weak transcription | Fetal Muscle Trunk | muscle |
| 8 | chr12:29873000-29880800 | Weak transcription | Hela-S3 | cervix |
| 9 | chr12:29873200-29880800 | Weak transcription | Spleen | Spleen |
| 10 | chr12:29875400-29891600 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 11 | chr12:29878000-29883000 | Enhancers | Left Ventricle | heart |
| 12 | chr12:29878200-29879600 | Enhancers | Fetal Adrenal Gland | Adrenal Gland |
| 13 | chr12:29878200-29879600 | Enhancers | HSMMtube | muscle |
| 14 | chr12:29878200-29879800 | Enhancers | Brain Hippocampus Middle | brain |
| 15 | chr12:29878200-29880000 | Enhancers | HUVEC | blood vessel |
| 16 | chr12:29878200-29881200 | Enhancers | Cortex derived primary cultured neurospheres | brain |
| 17 | chr12:29878200-29881800 | Enhancers | Fetal Muscle Leg | muscle |
| 18 | chr12:29878200-29889000 | Enhancers | Colon Smooth Muscle | Colon |
| 19 | chr12:29878400-29879600 | Enhancers | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 20 | chr12:29878400-29879800 | Enhancers | H9 Derived Neuron Cultured Cells | ES cell derived |
| 21 | chr12:29878400-29879800 | Enhancers | Fetal Heart | heart |
| 22 | chr12:29878400-29880000 | Enhancers | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 23 | chr12:29878400-29880200 | Enhancers | Rectal Smooth Muscle | rectum |
| 24 | chr12:29878400-29887400 | Weak transcription | Aorta | Aorta |
| 25 | chr12:29878600-29879600 | Enhancers | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 26 | chr12:29878600-29879600 | Enhancers | HSMM | muscle |
| 27 | chr12:29878600-29879800 | Enhancers | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 28 | chr12:29878600-29879800 | Enhancers | Breast Myoepithelial Primary Cells | Breast |
| 29 | chr12:29878600-29879800 | Flanking Active TSS | Ganglion Eminence derived primary cultured neurospheres | brain |
| 30 | chr12:29878600-29880200 | Enhancers | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 31 | chr12:29878800-29879400 | Enhancers | NHDF-Ad | bronchial |
| 32 | chr12:29878800-29879600 | Enhancers | Fetal Brain Male | brain |
| 33 | chr12:29878800-29879600 | Flanking Active TSS | Skeletal Muscle Male | skeletal muscle |
| 34 | chr12:29878800-29879600 | Flanking Active TSS | Skeletal Muscle Female | skeletal muscle |
| 35 | chr12:29878800-29879800 | Flanking Active TSS | Muscle Satellite Cultured Cells | -- |
| 36 | chr12:29878800-29880000 | Enhancers | IMR90 fetal lung fibroblasts Cell Line | lung |
| 37 | chr12:29878800-29880000 | Enhancers | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 38 | chr12:29878800-29880000 | Enhancers | Brain Substantia Nigra | brain |
| 39 | chr12:29878800-29880000 | Enhancers | Fetal Kidney | kidney |
| 40 | chr12:29878800-29880000 | Enhancers | Right Ventricle | heart |
| 41 | chr12:29878800-29880200 | Enhancers | iPS-18 Cell Line | embryonic stem cell |
| 42 | chr12:29878800-29880400 | Enhancers | Adipose Nuclei | Adipose |
| 43 | chr12:29878800-29881600 | Enhancers | Fetal Stomach | stomach |
| 44 | chr12:29879000-29879400 | Flanking Active TSS | Brain Germinal Matrix | brain |
| 45 | chr12:29879000-29879400 | Flanking Active TSS | Osteobl | bone |
| 46 | chr12:29879000-29879600 | Enhancers | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 47 | chr12:29879000-29879600 | Enhancers | NH-A | brain |
| 48 | chr12:29879000-29879800 | Enhancers | Brain Angular Gyrus | brain |
| 49 | chr12:29879000-29879800 | Enhancers | Ovary | ovary |
| 50 | chr12:29879000-29880000 | Enhancers | Duodenum Smooth Muscle | Duodenum |
