Variant report

Variant	rs61802340
Chromosome Location	chr1:161591058-161591059
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	POLR2A	chr1:161590935-161591981	H1-hESC	embryonic stem cell:	n/a	n/a
2	YY1	chr1:161591036-161591763	H1-hESC	embryonic stem cell:	n/a	chr1:161591185-161591207
3	MAFK	chr1:161590994-161591256	HepG2	liver:	n/a	chr1:161591072-161591081 chr1:161591070-161591086 chr1:161591075-161591086 chr1:161591074-161591085 chr1:161591070-161591085 chr1:161591112-161591128 chr1:161591108-161591125
4	PML	chr1:161590993-161591860	GM12878	blood:	n/a	n/a
5	POU2F2	chr1:161590935-161591805	GM12891	blood:	n/a	chr1:161590999-161591012
6	TAF1	chr1:161591027-161591617	H1-hESC	embryonic stem cell:	n/a	n/a
7	ATF3	chr1:161591029-161591868	A549	lung:	n/a	n/a
8	MAFK	chr1:161590976-161592260	K562	blood:	n/a	chr1:161591072-161591081 chr1:161591070-161591086 chr1:161591075-161591086 chr1:161591074-161591085 chr1:161591070-161591085 chr1:161591112-161591128 chr1:161591108-161591125
9	POLR2A	chr1:161590927-161591495	MCF10A-Er-Src	breast:	n/a	n/a
10	POLR2A	chr1:161591026-161591561	GM12891	blood:	n/a	n/a
11	TCF12	chr1:161590987-161591843	A549	lung:	n/a	n/a
12	FOS	chr1:161590899-161591452	MCF10A-Er-Src	breast:	n/a	chr1:161591071-161591079 chr1:161591070-161591080 chr1:161591069-161591081 chr1:161591070-161591080
13	MAFF	chr1:161590893-161591701	K562	blood:	n/a	chr1:161591069-161591087
14	BHLHE40	chr1:161590994-161591717	K562	blood:	n/a	n/a
15	FOXM1	chr1:161591048-161592095	GM12878	blood:	n/a	n/a
16	YY1	chr1:161591035-161591719	K562	blood:	n/a	chr1:161591185-161591207
17	POLR2A	chr1:161591032-161591497	GM12891	blood:	n/a	n/a
18	POLR2A	chr1:161591012-161592191	GM12892	blood:	n/a	n/a
19	MAFK	chr1:161590987-161591605	H1-hESC	embryonic stem cell:	n/a	chr1:161591072-161591081 chr1:161591070-161591086 chr1:161591075-161591086 chr1:161591074-161591085 chr1:161591070-161591085 chr1:161591112-161591128 chr1:161591108-161591125
20	CBX3	chr1:161590923-161592499	K562	blood:	n/a	n/a
21	YY1	chr1:161591052-161591687	GM12878	blood:	n/a	chr1:161591185-161591207
22	POLR2A	chr1:161590965-161591555	SK-N-MC	brain:	n/a	n/a
23	IRF1	chr1:161590998-161592184	K562	blood:	n/a	chr1:161591070-161591079 chr1:161591569-161591576
24	YY1	chr1:161590975-161591662	H1-hESC	embryonic stem cell:	n/a	chr1:161591185-161591207
25	TEAD4	chr1:161590909-161592338	K562	blood:	n/a	n/a
26	MYC	chr1:161591053-161592162	K562	blood:	n/a	chr1:161591589-161591596
27	MAX	chr1:161591038-161591743	K562	blood:	n/a	chr1:161591589-161591596
28	BCLAF1	chr1:161591042-161591775	GM12878	blood:	n/a	n/a
29	PAX5	chr1:161591055-161591341	GM12878	blood:	n/a	n/a
30	BATF	chr1:161590904-161591183	GM12878	blood:	n/a	chr1:161591072-161591082
31	MAFF	chr1:161590979-161591264	HepG2	liver:	n/a	chr1:161591069-161591087
32	MAFK	chr1:161590913-161591622	Hela-S3	cervix:	n/a	chr1:161591072-161591081 chr1:161591070-161591086 chr1:161591075-161591086 chr1:161591074-161591085 chr1:161591070-161591085 chr1:161591112-161591128 chr1:161591108-161591125
33	BATF	chr1:161590844-161591565	GM12878	blood:	n/a	chr1:161591072-161591082
34	BACH1	chr1:161590978-161591566	K562	blood:	n/a	n/a
35	IRF4	chr1:161591039-161592201	GM12878	blood:	n/a	n/a
36	YY1	chr1:161591051-161591656	A549	lung:	n/a	chr1:161591185-161591207
37	YY1	chr1:161591034-161591740	GM12878	blood:	n/a	chr1:161591185-161591207
38	SP1	chr1:161591034-161591771	A549	lung:	n/a	n/a
39	YY1	chr1:161591048-161591723	GM12892	blood:	n/a	chr1:161591185-161591207
40	IRF4	chr1:161591001-161591746	GM12878	blood:	n/a	n/a
41	FOS	chr1:161590991-161591561	MCF10A-Er-Src	breast:	n/a	chr1:161591071-161591079 chr1:161591070-161591080 chr1:161591069-161591081 chr1:161591070-161591080
42	JUND	chr1:161591055-161592278	K562	blood:	n/a	chr1:161591071-161591079 chr1:161591070-161591080 chr1:161591069-161591081 chr1:161591070-161591080
43	CEBPB	chr1:161590982-161592224	GM12878	blood:	n/a	n/a
44	MYC	chr1:161590899-161591687	MCF10A-Er-Src	breast:	n/a	chr1:161591589-161591596
45	SREBP2	chr1:161590916-161592391	GM12878	blood:	n/a	n/a
46	FOS	chr1:161590981-161591485	MCF10A-Er-Src	breast:	n/a	chr1:161591071-161591079 chr1:161591070-161591080 chr1:161591069-161591081 chr1:161591070-161591080
47	POU2F2	chr1:161590909-161592201	GM12878	blood:	n/a	chr1:161590999-161591012
48	NFIC	chr1:161591036-161592064	GM12878	blood:	n/a	n/a
49	FOS	chr1:161590980-161591594	MCF10A-Er-Src	breast:	n/a	chr1:161591071-161591079 chr1:161591070-161591080 chr1:161591069-161591081 chr1:161591070-161591080
50	TRIM28	chr1:161591048-161592485	K562	blood:	n/a	n/a

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:161591008..161595787-chr1:161695155..161699954,5	K562	blood:
2	chr1:161509609..161513548-chr1:161589499..161593604,6	K562	blood:

Variant related genes	Relation type
RPS23P9	TF binding region
ENSG00000162746	Chromatin interaction

Extended variants
information (count: 215 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs35369398	0.96[AFR][1000 genomes];0.85[AMR][1000 genomes];0.99[ASN][1000 genomes]
rs3856220	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs428194	0.88[ASN][1000 genomes]
rs475807	0.92[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs61802997	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs61803002	0.81[ASN][1000 genomes]
rs61803003	1.00[AFR][1000 genomes];0.87[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs61803004	0.83[AFR][1000 genomes];0.83[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs61803005	1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs61803008	1.00[AFR][1000 genomes];0.83[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs61803012	0.83[AFR][1000 genomes];0.95[ASN][1000 genomes]
rs61803027	0.83[AFR][1000 genomes]
rs67167367	0.97[ASN][1000 genomes]
rs67411091	0.90[AFR][1000 genomes];0.97[ASN][1000 genomes]
rs71519214	0.89[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:200 , 50 per page) page: 1 2 3 4

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv432986	chr1:161221133-161673682	Flanking Active TSS Enhancers Bivalent Enhancer Active TSS Strong transcription Weak transcription Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	67 gene(s)	inside rSNPs	diseases
2	nsv432998	chr1:161335902-161673682	Active TSS Enhancers Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Strong transcription ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	62 gene(s)	inside rSNPs	diseases
3	nsv433009	chr1:161343927-161639328	Flanking Active TSS Bivalent Enhancer Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Active TSS Enhancers ZNF genes & repeats Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	58 gene(s)	inside rSNPs	diseases
4	esv2756866	chr1:161344255-161681552	Bivalent Enhancer Enhancers Flanking Active TSS Weak transcription Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	62 gene(s)	inside rSNPs	diseases
5	esv2758972	chr1:161344255-161681552	Bivalent/Poised TSS Bivalent Enhancer Flanking Active TSS Enhancers Active TSS Flanking Bivalent TSS/Enh Weak transcription Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	62 gene(s)	inside rSNPs	diseases
6	nsv433020	chr1:161355634-161673682	Active TSS Enhancers Weak transcription Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	60 gene(s)	inside rSNPs	diseases
7	esv2754329	chr1:161355728-161673682	Active TSS Enhancers Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	60 gene(s)	inside rSNPs	diseases
8	nsv433031	chr1:161355728-161673682	Flanking Active TSS Active TSS Bivalent/Poised TSS Bivalent Enhancer Enhancers Weak transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	60 gene(s)	inside rSNPs	diseases
9	nsv433042	chr1:161372038-161673682	Enhancers Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Weak transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	28 gene(s)	inside rSNPs	diseases
10	nsv433053	chr1:161389417-161673682	Enhancers Active TSS Flanking Active TSS Weak transcription Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	26 gene(s)	inside rSNPs	diseases
11	nsv433075	chr1:161395555-161673682	Flanking Bivalent TSS/Enh Enhancers Active TSS Bivalent Enhancer Weak transcription Flanking Active TSS Bivalent/Poised TSS Genic enhancers Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	25 gene(s)	inside rSNPs	diseases
12	nsv831725	chr1:161403030-161666732	Bivalent/Poised TSS Flanking Active TSS Weak transcription Enhancers Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	22 gene(s)	inside rSNPs	diseases
13	esv2757757	chr1:161406313-161624427	Active TSS Flanking Active TSS Enhancers Bivalent/Poised TSS Bivalent Enhancer Weak transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases
14	nsv428257	chr1:161406315-161868263	Bivalent/Poised TSS Genic enhancers Active TSS Transcr. at gene 5' and 3' Enhancers Weak transcription Bivalent Enhancer Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	50 gene(s)	inside rSNPs	diseases
15	esv1821964	chr1:161410458-161642332	Active TSS Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Weak transcription Bivalent Enhancer Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases
16	esv1812323	chr1:161413114-161624425	Active TSS Weak transcription Flanking Active TSS Enhancers Strong transcription Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases
17	esv1814016	chr1:161413114-161624425	Weak transcription Active TSS Bivalent/Poised TSS Flanking Active TSS Enhancers Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases
18	nsv427841	chr1:161413114-161624425	Active TSS Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription Bivalent Enhancer Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases
19	nsv831736	chr1:161413123-161624424	Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Weak transcription Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases
20	esv1824713	chr1:161414555-161642332	Enhancers Active TSS Flanking Bivalent TSS/Enh Weak transcription Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Genic enhancers Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases
21	esv1821631	chr1:161414640-161644896	Enhancers Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Active TSS Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases
22	esv2750812	chr1:161463498-161639559	Active TSS Weak transcription Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases
23	esv2752696	chr1:161463498-161639559	Enhancers Weak transcription Bivalent/Poised TSS Bivalent Enhancer Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases
24	esv2750813	chr1:161463498-161673682	Enhancers Weak transcription Bivalent/Poised TSS Active TSS Flanking Active TSS Genic enhancers Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	21 gene(s)	inside rSNPs	diseases
25	esv2750814	chr1:161463498-161673682	Active TSS Bivalent Enhancer Enhancers Flanking Active TSS Weak transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	21 gene(s)	inside rSNPs	diseases
26	esv2755678	chr1:161463498-161678377	Enhancers Flanking Active TSS Bivalent Enhancer Weak transcription Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Strong transcription Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	21 gene(s)	inside rSNPs	diseases
27	esv2752664	chr1:161463601-161673682	Bivalent/Poised TSS Active TSS Flanking Active TSS Enhancers Weak transcription Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	21 gene(s)	inside rSNPs	diseases
28	esv2756399	chr1:161463814-161639559	Bivalent Enhancer Active TSS ZNF genes & repeats Enhancers Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases
29	nsv433086	chr1:161465420-161639559	Flanking Active TSS Strong transcription Enhancers Active TSS Flanking Bivalent TSS/Enh Weak transcription Bivalent/Poised TSS Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases
30	esv1799809	chr1:161467963-161650576	Flanking Active TSS Enhancers Active TSS Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Strong transcription Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases
31	esv1819152	chr1:161473564-161647435	Enhancers Active TSS Weak transcription Flanking Active TSS Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases
32	esv1813267	chr1:161473564-161650576	Flanking Active TSS Active TSS Weak transcription Enhancers Strong transcription Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases
33	esv1815625	chr1:161475983-161650576	Enhancers Bivalent Enhancer Active TSS Weak transcription Flanking Active TSS Bivalent/Poised TSS Genic enhancers Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases
34	esv1850573	chr1:161475983-161650576	Enhancers Active TSS Flanking Active TSS Bivalent/Poised TSS Weak transcription Flanking Bivalent TSS/Enh Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases
35	nsv1007723	chr1:161476489-161638501	Enhancers Active TSS Weak transcription Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases
36	nsv8502	chr1:161477348-161646550	Enhancers Flanking Active TSS Weak transcription Bivalent/Poised TSS Genic enhancers Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases
37	nsv1005277	chr1:161478524-161638501	Transcr. at gene 5' and 3' Active TSS Flanking Active TSS Enhancers Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Strong transcription Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases
38	esv2763869	chr1:161478536-161638530	Weak transcription Active TSS Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS Enhancers Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases
39	esv33393	chr1:161478681-162080327	Weak transcription Enhancers Strong transcription Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS Active TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	59 gene(s)	inside rSNPs	diseases
40	nsv433097	chr1:161478751-161639559	Enhancers Active TSS Weak transcription Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Strong transcription Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases
41	esv1815003	chr1:161479291-161647435	Active TSS Weak transcription Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases
42	esv1808606	chr1:161479291-161649074	Active TSS Bivalent/Poised TSS Flanking Active TSS Enhancers Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Strong transcription Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases
43	esv1805208	chr1:161479438-161648225	Enhancers Bivalent/Poised TSS Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases
44	nsv519779	chr1:161479745-161638386	Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases
45	nsv464173	chr1:161479745-161646807	Flanking Active TSS Enhancers Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases
46	nsv825176	chr1:161479845-161646878	Active TSS Enhancers Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases
47	nsv820341	chr1:161479845-161648148	Transcr. at gene 5' and 3' Bivalent/Poised TSS Enhancers Flanking Active TSS Active TSS Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases
48	esv1814148	chr1:161479861-161644896	Active TSS Enhancers Bivalent/Poised TSS Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases
49	esv1844518	chr1:161479861-161646722	Enhancers Bivalent Enhancer Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS ZNF genes & repeats Genic enhancers Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases
50	esv12861	chr1:161479945-161646758	Active TSS Enhancers Flanking Active TSS Weak transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:104 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:161590200-161591200	Active TSS	HUES64 Cell Line	embryonic stem cell
2	chr1:161590200-161591400	Active TSS	Primary T cells effector/memory enriched fromperipheralblood	blood
3	chr1:161590400-161591800	Active TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
4	chr1:161590400-161592000	Active TSS	H9 Cell Line	embryonic stem cell
5	chr1:161590400-161592000	Bivalent/Poised TSS	iPS-18 Cell Line	embryonic stem cell
6	chr1:161590400-161592200	Bivalent/Poised TSS	H1 Cell Line	embryonic stem cell
7	chr1:161590400-161592200	Active TSS	A549	lung
8	chr1:161590600-161591400	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
9	chr1:161590600-161591400	Flanking Bivalent TSS/Enh	Primary B cells from cord blood	blood
10	chr1:161590600-161591400	Bivalent/Poised TSS	Primary T regulatory cells fromperipheralblood	blood
11	chr1:161590600-161591600	Active TSS	HUES6 Cell Line	embryonic stem cell
12	chr1:161590600-161591600	Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
13	chr1:161590600-161591800	Active TSS	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
14	chr1:161590600-161591800	Active TSS	HUES48 Cell Line	embryonic stem cell
15	chr1:161590600-161591800	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
16	chr1:161590600-161591800	Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
17	chr1:161590600-161591800	Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
18	chr1:161590600-161591800	Active TSS	Brain Angular Gyrus	brain
19	chr1:161590600-161591800	Active TSS	Brain Anterior Caudate	brain
20	chr1:161590600-161591800	Active TSS	HMEC	breast
21	chr1:161590600-161592000	Active TSS	iPS-15b Cell Line	embryonic stem cell
22	chr1:161590600-161592000	Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
23	chr1:161590600-161592000	Active TSS	Hela-S3	cervix
24	chr1:161590600-161592200	Active TSS	ES-I3 Cell Line	embryonic stem cell
25	chr1:161590600-161592200	Bivalent/Poised TSS	iPS-20b Cell Line	embryonic stem cell
26	chr1:161590600-161592200	Active TSS	iPS DF 6.9 Cell Line	embryonic stem cell
27	chr1:161590600-161592200	Flanking Active TSS	Primary hematopoietic stem cells short term culture	blood
28	chr1:161590600-161592200	Active TSS	NH-A	brain
29	chr1:161590800-161591200	Flanking Bivalent TSS/Enh	Primary T cells from cord blood	blood
30	chr1:161590800-161591200	Active TSS	Primary T cells fromperipheralblood	blood
31	chr1:161590800-161591200	Active TSS	Primary Natural Killer cells fromperipheralblood	blood
32	chr1:161590800-161591200	Active TSS	Rectal Mucosa Donor 29	rectum
33	chr1:161590800-161591400	Active TSS	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
34	chr1:161590800-161591400	Active TSS	Primary T helper naive cells fromperipheralblood	blood
35	chr1:161590800-161591400	Active TSS	Primary T killer naive cells fromperipheralblood	blood
36	chr1:161590800-161591400	Active TSS	Primary T killer memory cells from peripheral blood	blood
37	chr1:161590800-161591400	Flanking Active TSS	HUVEC	blood vessel
38	chr1:161590800-161591600	Flanking Bivalent TSS/Enh	Primary hematopoietic stem cells G-CSF-mobilized Female	--
39	chr1:161590800-161591600	Active TSS	Muscle Satellite Cultured Cells	--
40	chr1:161590800-161591600	Active TSS	Fetal Brain Male	brain
41	chr1:161590800-161591600	Active TSS	NHDF-Ad	bronchial
42	chr1:161590800-161591600	Active TSS	Osteobl	bone
43	chr1:161590800-161591800	Active TSS	ES-WA7 Cell Line	embryonic stem cell
44	chr1:161590800-161591800	Bivalent/Poised TSS	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
45	chr1:161590800-161591800	Active TSS	iPS DF 19.11 Cell Line	embryonic stem cell
46	chr1:161590800-161591800	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
47	chr1:161590800-161591800	Active TSS	ES-UCSF4 Cell Line	embryonic stem cell
48	chr1:161590800-161591800	Flanking Active TSS	Primary B cells from peripheral blood	blood
49	chr1:161590800-161591800	Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
50	chr1:161590800-161591800	Active TSS	Cortex derived primary cultured neurospheres	brain

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