The 2.0 version of rSNPBase

Variant report

Variant rs61809719
Chromosome Location chr1:144612737-144612738
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:78 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:144594600-144621200 Weak transcription Gastric stomach
2 chr1:144594600-144622000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr1:144594600-144622000 Weak transcription Placenta Placenta
4 chr1:144594800-144618000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr1:144594800-144618000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
6 chr1:144594800-144618000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
7 chr1:144594800-144618000 Weak transcription Adipose Nuclei Adipose
8 chr1:144594800-144619400 Weak transcription Aorta Aorta
9 chr1:144594800-144620000 Weak transcription Rectal Smooth Muscle rectum
10 chr1:144594800-144620200 Weak transcription Rectal Mucosa Donor 31 rectum
11 chr1:144594800-144620600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
12 chr1:144594800-144621200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
13 chr1:144594800-144621200 Weak transcription Fetal Lung lung
14 chr1:144594800-144621200 Weak transcription Rectal Mucosa Donor 29 rectum
15 chr1:144594800-144621400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
16 chr1:144594800-144621400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
17 chr1:144594800-144621600 Weak transcription HSMM muscle
18 chr1:144594800-144621800 Weak transcription Brain Germinal Matrix brain
19 chr1:144594800-144621800 Weak transcription HSMMtube muscle
20 chr1:144594800-144622000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
21 chr1:144594800-144622000 Weak transcription Duodenum Mucosa Duodenum
22 chr1:144594800-144623400 Weak transcription Primary T cells from cord blood blood
23 chr1:144594800-144623400 Weak transcription HUVEC blood vessel
24 chr1:144594800-144624000 Weak transcription Right Ventricle heart
25 chr1:144595800-144623200 Weak transcription Primary T regulatory cells fromperipheralblood blood
26 chr1:144596200-144616600 Weak transcription Primary hematopoietic stem cells short term culture blood
27 chr1:144596200-144618200 Weak transcription Primary T killer memory cells from peripheral blood blood
28 chr1:144596200-144621400 Weak transcription Pancreas Pancrea
29 chr1:144596400-144622000 Weak transcription NH-A brain
30 chr1:144598800-144621400 Weak transcription Colon Smooth Muscle Colon
31 chr1:144598800-144623600 Weak transcription Hela-S3 cervix
32 chr1:144599000-144621200 Weak transcription Primary T helper naive cells from peripheral blood blood
33 chr1:144599200-144621600 Weak transcription Duodenum Smooth Muscle Duodenum
34 chr1:144599400-144618000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
35 chr1:144599400-144618000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
36 chr1:144599400-144618200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
37 chr1:144599400-144619400 Weak transcription Fetal Muscle Leg muscle
38 chr1:144599400-144619400 Weak transcription Osteobl bone
39 chr1:144599400-144619600 Weak transcription Skeletal Muscle Female skeletal muscle
40 chr1:144599400-144620400 Weak transcription Fetal Muscle Trunk muscle
41 chr1:144599400-144621600 Weak transcription HMEC breast
42 chr1:144599400-144621800 Weak transcription Primary T helper naive cells fromperipheralblood blood
43 chr1:144599400-144622000 Weak transcription Fetal Stomach stomach
44 chr1:144599400-144623400 Weak transcription Muscle Satellite Cultured Cells --
45 chr1:144599600-144618400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
46 chr1:144599800-144623800 Weak transcription Fetal Intestine Small intestine
47 chr1:144600000-144616200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
48 chr1:144600000-144618000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
49 chr1:144600000-144620200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
50 chr1:144600800-144617200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin

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Last update: Aug 31, 2015