Variant report

Variant rs61811250
Chromosome Location chr1:180886039-180886040
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:65 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:180882400-180894600 Weak transcription Pancreas Pancrea
2 chr1:180882600-180894000 Weak transcription Brain Substantia Nigra brain
3 chr1:180882800-180886200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
4 chr1:180882800-180887000 Weak transcription Spleen Spleen
5 chr1:180882800-180887200 Weak transcription Placenta Placenta
6 chr1:180882800-180887400 Weak transcription Gastric stomach
7 chr1:180882800-180888000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
8 chr1:180882800-180889400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr1:180882800-180891200 Weak transcription H9 Cell Line embryonic stem cell
10 chr1:180882800-180892600 Weak transcription Esophagus oesophagus
11 chr1:180882800-180894400 Weak transcription Pancreatic Islets Pancreatic Islet
12 chr1:180883000-180886800 Weak transcription HSMMtube muscle
13 chr1:180883000-180891200 Weak transcription Fetal Brain Female brain
14 chr1:180883000-180891600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
15 chr1:180883000-180892200 Weak transcription Brain Germinal Matrix brain
16 chr1:180883000-180894600 Weak transcription Right Ventricle heart
17 chr1:180883000-180894800 Weak transcription Colonic Mucosa Colon
18 chr1:180883200-180892200 Weak transcription Right Atrium heart
19 chr1:180883200-180894200 Weak transcription Brain Angular Gyrus brain
20 chr1:180883400-180887800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
21 chr1:180883400-180892600 Weak transcription Brain Hippocampus Middle brain
22 chr1:180883600-180886200 Weak transcription NHDF-Ad bronchial
23 chr1:180883600-180886800 Weak transcription Cortex derived primary cultured neurospheres brain
24 chr1:180883600-180886800 Weak transcription Left Ventricle heart
25 chr1:180883600-180887200 Weak transcription Duodenum Smooth Muscle Duodenum
26 chr1:180883600-180887600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
27 chr1:180883600-180888600 Weak transcription Colon Smooth Muscle Colon
28 chr1:180883600-180891800 Weak transcription HSMM muscle
29 chr1:180883600-180892000 Weak transcription Fetal Heart heart
30 chr1:180883600-180892200 Weak transcription Muscle Satellite Cultured Cells --
31 chr1:180883600-180894200 Weak transcription Brain Inferior Temporal Lobe brain
32 chr1:180883600-180894200 Weak transcription Fetal Lung lung
33 chr1:180883600-180894800 Weak transcription Rectal Mucosa Donor 29 rectum
34 chr1:180883600-180895000 Weak transcription Rectal Smooth Muscle rectum
35 chr1:180884200-180886600 Strong transcription Fetal Stomach stomach
36 chr1:180885000-180886800 Strong transcription Stomach Smooth Muscle stomach
37 chr1:180885000-180887200 Strong transcription Ovary ovary
38 chr1:180885200-180886200 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
39 chr1:180885200-180887400 Weak transcription K562 blood
40 chr1:180885200-180891000 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
41 chr1:180885400-180886400 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
42 chr1:180885400-180887600 Strong transcription Osteobl bone
43 chr1:180885400-180888200 Strong transcription Foreskin Melanocyte Primary Cells skin01 Skin
44 chr1:180885400-180889600 Genic enhancers Fetal Muscle Trunk muscle
45 chr1:180885400-180891200 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
46 chr1:180885600-180886600 Strong transcription Brain Cingulate Gyrus brain
47 chr1:180885600-180887200 Genic enhancers iPS DF 19.11 Cell Line embryonic stem cell
48 chr1:180885600-180887800 Strong transcription Adipose Nuclei Adipose
49 chr1:180885600-180887800 Strong transcription Brain Dorsolateral Prefrontal Cortex brain
50 chr1:180885600-180888200 Strong transcription Placenta Amnion Placenta Amnion

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