Variant report

Variant	rs61818322
Chromosome Location	chr1:215291988-215291989
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:4)

rs_ID	r²[population]
rs61818070	1.00[AMR][1000 genomes]
rs61818349	1.00[AMR][1000 genomes]
rs61819678	1.00[AMR][1000 genomes]
rs61819679	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv873169	chr1:215264486-215453286	Weak transcription Active TSS Strong transcription Enhancers Flanking Active TSS ZNF genes & repeats Genic enhancers Bivalent/Poised TSS	Chromatin interactive region miRNA target site	n/a	inside rSNPs	diseases

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:215287000-215293800	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
2	chr1:215288200-215294000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
3	chr1:215288800-215306600	Weak transcription	NHLF	lung
4	chr1:215289400-215293000	Weak transcription	Hela-S3	cervix
5	chr1:215290000-215293600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
6	chr1:215290200-215293400	Weak transcription	Muscle Satellite Cultured Cells	--
7	chr1:215290400-215292600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
8	chr1:215290800-215292600	Genic enhancers	NHDF-Ad	bronchial
9	chr1:215291600-215292600	Enhancers	Fetal Brain Male	brain
10	chr1:215291600-215292600	Weak transcription	Fetal Brain Female	brain
11	chr1:215291600-215300400	Weak transcription	Osteobl	bone

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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