Variant report

Variant	rs61828236
Chromosome Location	chr1:211880281-211880282
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs2083903	0.83[AMR][1000 genomes]
rs55635245	0.83[AMR][1000 genomes]
rs61828229	0.87[AMR][1000 genomes]
rs61828232	1.00[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs61828233	0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61828234	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61828235	0.95[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61828237	1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61828239	0.89[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:211872800-211884000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
2	chr1:211876800-211880400	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
3	chr1:211879200-211884600	Weak transcription	Esophagus	oesophagus
4	chr1:211879200-211913600	Weak transcription	Right Atrium	heart
5	chr1:211879400-211884000	Weak transcription	Spleen	Spleen
6	chr1:211880000-211883600	Weak transcription	Primary neutrophils fromperipheralblood	blood
7	chr1:211880200-211884600	Weak transcription	NHEK	skin

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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