Variant report

Variant	rs61829421
Chromosome Location	chr10:4341079-4341080
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs61829416	1.00[AMR][1000 genomes]
rs61829430	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv894785	chr10:4306421-4372629	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:4334800-4342600	Weak transcription	Fetal Lung	lung
2	chr10:4334800-4349200	Weak transcription	Right Atrium	heart
3	chr10:4336200-4343000	Weak transcription	NHDF-Ad	bronchial
4	chr10:4337800-4345200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
5	chr10:4337800-4349200	Weak transcription	Fetal Heart	heart
6	chr10:4338800-4342200	Weak transcription	HUES48 Cell Line	embryonic stem cell
7	chr10:4338800-4343600	Weak transcription	Fetal Brain Male	brain
8	chr10:4341000-4341200	Enhancers	H9 Cell Line	embryonic stem cell

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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