The 2.0 version of rSNPBase

Variant report

Variant rs61838116
Chromosome Location chr1:222995404-222995405
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:41 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:222989000-222999200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr1:222989200-222997600 Weak transcription Fetal Brain Male brain
3 chr1:222989200-222999000 Weak transcription Lung lung
4 chr1:222989400-222996800 Weak transcription HUES48 Cell Line embryonic stem cell
5 chr1:222989400-222999000 Weak transcription Stomach Mucosa stomach
6 chr1:222989400-223002800 Weak transcription Fetal Intestine Small intestine
7 chr1:222989400-223026800 Weak transcription Fetal Muscle Leg muscle
8 chr1:222990200-222997000 Weak transcription iPS-15b Cell Line embryonic stem cell
9 chr1:222990400-222997600 Weak transcription iPS-18 Cell Line embryonic stem cell
10 chr1:222990400-223027400 Weak transcription Primary B cells from cord blood blood
11 chr1:222991000-222996000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
12 chr1:222991000-222996600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
13 chr1:222991000-222998000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
14 chr1:222991200-222996000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
15 chr1:222991200-223010200 Weak transcription Primary B cells from peripheral blood blood
16 chr1:222991400-222996800 Weak transcription HUES64 Cell Line embryonic stem cell
17 chr1:222991600-222997800 Weak transcription A549 lung
18 chr1:222991600-222998000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
19 chr1:222991800-222997600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
20 chr1:222991800-223001800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
21 chr1:222991800-223003200 Weak transcription Stomach Smooth Muscle stomach
22 chr1:222991800-223017200 Weak transcription Aorta Aorta
23 chr1:222992000-222997400 Weak transcription ES-I3 Cell Line embryonic stem cell
24 chr1:222992000-222997600 Weak transcription iPS-20b Cell Line embryonic stem cell
25 chr1:222992000-222997800 Weak transcription Muscle Satellite Cultured Cells --
26 chr1:222992000-222998000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
27 chr1:222992200-222995800 Weak transcription Pancreatic Islets Pancreatic Islet
28 chr1:222992400-222998000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
29 chr1:222992600-222998000 Weak transcription Fetal Lung lung
30 chr1:222993800-222995600 Enhancers Rectal Smooth Muscle rectum
31 chr1:222994000-222998200 Weak transcription HMEC breast
32 chr1:222994000-223003200 Weak transcription Osteobl bone
33 chr1:222994600-222997600 Weak transcription Fetal Kidney kidney
34 chr1:222994600-223003400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
35 chr1:222994800-222997800 Weak transcription Colon Smooth Muscle Colon
36 chr1:222994800-222998000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
37 chr1:222994800-222998000 Weak transcription Duodenum Smooth Muscle Duodenum
38 chr1:222994800-223003200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
39 chr1:222995000-223002600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
40 chr1:222995200-222998000 Enhancers Hela-S3 cervix
41 chr1:222995200-223003400 Weak transcription NHDF-Ad bronchial

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Last update: Aug 31, 2015