Variant report

Variant	rs61838362
Chromosome Location	chr10:26607551-26607552
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 17 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:16)

rs_ID	r²[population]
rs12241667	0.92[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs12245460	0.88[EUR][1000 genomes]
rs12265385	0.92[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs1888251	0.92[EUR][1000 genomes]
rs2150158	0.92[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs3847380	0.80[EUR][1000 genomes]
rs4749112	0.87[EUR][1000 genomes]
rs4749113	0.92[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs7068091	0.92[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs7079553	0.81[AMR][1000 genomes];0.92[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs7079848	0.92[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs7080952	0.81[AMR][1000 genomes];0.92[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs7902107	0.80[EUR][1000 genomes]
rs8190764	0.80[EUR][1000 genomes]
rs8190780	0.80[EUR][1000 genomes]
rs882139	0.92[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv894975	chr10:26343356-27014467	Strong transcription Flanking Active TSS Enhancers Weak transcription Flanking Bivalent TSS/Enh Genic enhancers Active TSS Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	25 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:26607000-26608200	Weak transcription	Pancreas	Pancrea

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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