The 2.0 version of rSNPBase

Variant report

Variant rs61849912
Chromosome Location chr10:23406739-23406740
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:105 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:23385800-23409400 Weak transcription NH-A brain
2 chr10:23386000-23412000 Weak transcription Pancreatic Islets Pancreatic Islet
3 chr10:23386400-23409600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
4 chr10:23386400-23411200 Weak transcription Primary B cells from peripheral blood blood
5 chr10:23386400-23411200 Weak transcription Muscle Satellite Cultured Cells --
6 chr10:23386600-23407800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
7 chr10:23386600-23410600 Weak transcription Fetal Thymus thymus
8 chr10:23386600-23412200 Weak transcription Primary T regulatory cells fromperipheralblood blood
9 chr10:23387200-23411400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
10 chr10:23389200-23407400 Weak transcription Fetal Kidney kidney
11 chr10:23389400-23410600 Weak transcription Stomach Mucosa stomach
12 chr10:23389600-23409000 Weak transcription Placenta Amnion Placenta Amnion
13 chr10:23389600-23418600 Weak transcription H9 Cell Line embryonic stem cell
14 chr10:23390000-23408200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
15 chr10:23390000-23411800 Weak transcription HUVEC blood vessel
16 chr10:23390200-23409800 Weak transcription Small Intestine intestine
17 chr10:23392400-23410800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
18 chr10:23392800-23410800 Strong transcription Primary T cells from cord blood blood
19 chr10:23392800-23410800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
20 chr10:23393000-23410600 Strong transcription Fetal Stomach stomach
21 chr10:23393200-23410800 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
22 chr10:23393200-23410800 Strong transcription Duodenum Mucosa Duodenum
23 chr10:23393200-23411000 Strong transcription Adipose Nuclei Adipose
24 chr10:23393200-23411000 Strong transcription Liver Liver
25 chr10:23393600-23410800 Strong transcription Fetal Muscle Leg muscle
26 chr10:23393800-23410800 Strong transcription Breast Myoepithelial Primary Cells Breast
27 chr10:23394000-23408000 Weak transcription Esophagus oesophagus
28 chr10:23394000-23408200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
29 chr10:23394400-23407600 Weak transcription Dnd41 blood
30 chr10:23394600-23407400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
31 chr10:23395800-23414800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
32 chr10:23396000-23410600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
33 chr10:23396200-23407400 Weak transcription Colonic Mucosa Colon
34 chr10:23396200-23407400 Weak transcription Thymus Thymus
35 chr10:23396800-23407400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
36 chr10:23398800-23409800 Strong transcription Primary T helper cells fromperipheralblood blood
37 chr10:23400400-23408800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
38 chr10:23400600-23409400 Weak transcription HepG2 liver
39 chr10:23400600-23410600 Weak transcription NHDF-Ad bronchial
40 chr10:23401200-23407600 Weak transcription Right Ventricle heart
41 chr10:23401600-23410800 Strong transcription Primary hematopoietic stem cells short term culture blood
42 chr10:23402200-23413400 Weak transcription Brain Germinal Matrix brain
43 chr10:23402400-23410600 Weak transcription iPS-20b Cell Line embryonic stem cell
44 chr10:23402600-23412000 Weak transcription Primary T killer memory cells from peripheral blood blood
45 chr10:23402800-23407400 Weak transcription Primary T helper cells PMA-I stimulated --
46 chr10:23403000-23407400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
47 chr10:23403000-23407400 Weak transcription Rectal Smooth Muscle rectum
48 chr10:23403000-23407600 Weak transcription Primary T cells fromperipheralblood blood
49 chr10:23403000-23407600 Weak transcription Fetal Brain Male brain
50 chr10:23403800-23407400 Weak transcription HSMMtube muscle

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Last update: Aug 31, 2015