The 2.0 version of rSNPBase

Variant report

Variant rs61854365
Chromosome Location chr10:89821842-89821843
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:45 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:89802600-89822200 Weak transcription Aorta Aorta
2 chr10:89803400-89822000 Weak transcription Psoas Muscle Psoas
3 chr10:89818200-89822200 Weak transcription Rectal Smooth Muscle rectum
4 chr10:89818600-89822200 Weak transcription Pancreas Pancrea
5 chr10:89819000-89822200 Enhancers Dnd41 blood
6 chr10:89819400-89830400 Enhancers Primary T cells from cord blood blood
7 chr10:89819800-89823200 Enhancers Primary Natural Killer cells fromperipheralblood blood
8 chr10:89819800-89826400 Enhancers Primary T helper naive cells fromperipheralblood blood
9 chr10:89819800-89828200 Enhancers Primary T cells fromperipheralblood blood
10 chr10:89819800-89832800 Enhancers Primary B cells from peripheral blood blood
11 chr10:89820000-89822000 Enhancers GM12878-XiMat blood
12 chr10:89820000-89822200 Weak transcription Primary T killer memory cells from peripheral blood blood
13 chr10:89820000-89822800 Weak transcription Sigmoid Colon Sigmoid Colon
14 chr10:89820000-89826200 Enhancers Primary T helper cells PMA-I stimulated --
15 chr10:89820000-89826400 Enhancers Primary B cells from cord blood blood
16 chr10:89820800-89822000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
17 chr10:89820800-89822000 Weak transcription Left Ventricle heart
18 chr10:89820800-89822000 Weak transcription HepG2 liver
19 chr10:89820800-89822200 Weak transcription Primary T helper naive cells from peripheral blood blood
20 chr10:89820800-89822200 Weak transcription Gastric stomach
21 chr10:89820800-89822200 Weak transcription Lung lung
22 chr10:89820800-89823000 Weak transcription Esophagus oesophagus
23 chr10:89820800-89824600 Weak transcription Spleen Spleen
24 chr10:89820800-89829400 Enhancers Primary T helper cells fromperipheralblood blood
25 chr10:89820800-89832400 Enhancers Primary monocytes fromperipheralblood blood
26 chr10:89821000-89822000 Weak transcription Primary T killer naive cells fromperipheralblood blood
27 chr10:89821000-89823800 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
28 chr10:89821000-89823800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
29 chr10:89821200-89822000 Enhancers Monocytes-CD14+_RO01746 blood
30 chr10:89821400-89823800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
31 chr10:89821400-89828400 Enhancers Primary hematopoietic stem cells short term culture blood
32 chr10:89821600-89822000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
33 chr10:89821600-89822000 Enhancers Fetal Adrenal Gland Adrenal Gland
34 chr10:89821600-89822400 Active TSS Fetal Brain Male brain
35 chr10:89821600-89823200 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
36 chr10:89821600-89823200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
37 chr10:89821600-89823200 Enhancers Right Atrium heart
38 chr10:89821600-89823600 Flanking Active TSS Primary neutrophils fromperipheralblood blood
39 chr10:89821600-89823600 Enhancers Duodenum Mucosa Duodenum
40 chr10:89821600-89824400 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
41 chr10:89821600-89825400 Enhancers Breast Myoepithelial Primary Cells Breast
42 chr10:89821600-89826400 Enhancers Adipose Nuclei Adipose
43 chr10:89821600-89826400 Enhancers Fetal Lung lung
44 chr10:89821600-89828000 Enhancers Primary hematopoietic stem cells blood
45 chr10:89821600-89830800 Enhancers Fetal Thymus thymus

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Last update: Aug 31, 2015