Variant report

Variant	rs61861587
Chromosome Location	chr10:44302302-44302303
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 7 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:6)

rs_ID	r²[population]
rs10508873	1.00[AFR][1000 genomes]
rs17381521	1.00[AFR][1000 genomes]
rs2902567	1.00[AFR][1000 genomes]
rs61861562	1.00[AFR][1000 genomes]
rs61861589	1.00[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs61861590	0.83[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1049266	chr10:44296893-44323365	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Active TSS	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:22 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:44286000-44302600	Weak transcription	Aorta	Aorta
2	chr10:44290000-44303200	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
3	chr10:44292600-44304800	Weak transcription	Fetal Muscle Leg	muscle
4	chr10:44293400-44304600	Weak transcription	Ovary	ovary
5	chr10:44295000-44311000	Weak transcription	Left Ventricle	heart
6	chr10:44297200-44302800	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
7	chr10:44297600-44302800	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
8	chr10:44299600-44303000	Weak transcription	Fetal Thymus	thymus
9	chr10:44299800-44302800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
10	chr10:44300400-44304800	Weak transcription	Fetal Kidney	kidney
11	chr10:44300600-44307400	Enhancers	Osteobl	bone
12	chr10:44300800-44306000	Weak transcription	Fetal Lung	lung
13	chr10:44301000-44302400	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
14	chr10:44301000-44304800	Weak transcription	Adipose Nuclei	Adipose
15	chr10:44301400-44303600	Enhancers	Fetal Muscle Trunk	muscle
16	chr10:44301400-44304200	Enhancers	Primary T cells fromperipheralblood	blood
17	chr10:44301400-44304200	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
18	chr10:44301400-44307200	Enhancers	Primary T cells from cord blood	blood
19	chr10:44301600-44303200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
20	chr10:44301600-44303400	Weak transcription	NHDF-Ad	bronchial
21	chr10:44301600-44304600	Weak transcription	Right Atrium	heart
22	chr10:44301800-44303000	Weak transcription	Spleen	Spleen

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