The 2.0 version of rSNPBase

Variant report

Variant rs61868669
Chromosome Location chr10:97175752-97175753
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:73 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:97154400-97190800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr10:97156800-97182600 Weak transcription Esophagus oesophagus
3 chr10:97157000-97183200 Weak transcription Colonic Mucosa Colon
4 chr10:97157000-97190400 Weak transcription Spleen Spleen
5 chr10:97158600-97199600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
6 chr10:97159200-97187000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
7 chr10:97165400-97177200 Strong transcription HepG2 liver
8 chr10:97166400-97185800 Weak transcription Fetal Lung lung
9 chr10:97167200-97183200 Weak transcription Duodenum Mucosa Duodenum
10 chr10:97169000-97177000 Strong transcription Liver Liver
11 chr10:97169200-97180400 Weak transcription Ovary ovary
12 chr10:97169600-97204800 Weak transcription Rectal Mucosa Donor 31 rectum
13 chr10:97169800-97182800 Weak transcription Stomach Mucosa stomach
14 chr10:97170200-97184600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
15 chr10:97170600-97197800 Weak transcription H9 Cell Line embryonic stem cell
16 chr10:97171000-97179200 Weak transcription HUES48 Cell Line embryonic stem cell
17 chr10:97171000-97186600 Weak transcription iPS-15b Cell Line embryonic stem cell
18 chr10:97171000-97208000 Weak transcription HUES64 Cell Line embryonic stem cell
19 chr10:97172400-97176000 Strong transcription Placenta Placenta
20 chr10:97172400-97176600 Genic enhancers Colon Smooth Muscle Colon
21 chr10:97172400-97177000 Enhancers Cortex derived primary cultured neurospheres brain
22 chr10:97173400-97177000 Strong transcription Fetal Intestine Small intestine
23 chr10:97173600-97175800 Strong transcription Gastric stomach
24 chr10:97173600-97176000 Genic enhancers Aorta Aorta
25 chr10:97173600-97185200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
26 chr10:97173800-97175800 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
27 chr10:97173800-97175800 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
28 chr10:97173800-97175800 Strong transcription Fetal Intestine Large intestine
29 chr10:97173800-97175800 Transcr. at gene 5' and 3' Stomach Smooth Muscle stomach
30 chr10:97173800-97176000 Enhancers ES-UCSF4 Cell Line embryonic stem cell
31 chr10:97173800-97177200 Enhancers Fetal Brain Male brain
32 chr10:97174000-97175800 Flanking Active TSS Brain Anterior Caudate brain
33 chr10:97174200-97175800 Flanking Active TSS Brain Cingulate Gyrus brain
34 chr10:97174400-97175800 Flanking Active TSS Brain Inferior Temporal Lobe brain
35 chr10:97174400-97176000 Enhancers HMEC breast
36 chr10:97174600-97176000 Flanking Active TSS Brain Germinal Matrix brain
37 chr10:97174600-97176000 Enhancers Fetal Muscle Trunk muscle
38 chr10:97174600-97183600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
39 chr10:97174800-97175800 Flanking Active TSS Brain Hippocampus Middle brain
40 chr10:97174800-97175800 Flanking Active TSS Brain Dorsolateral Prefrontal Cortex brain
41 chr10:97174800-97175800 Flanking Active TSS Brain Substantia Nigra brain
42 chr10:97175000-97176000 Enhancers ES-I3 Cell Line embryonic stem cell
43 chr10:97175000-97176200 Enhancers H1 Cell Line embryonic stem cell
44 chr10:97175000-97176200 Flanking Active TSS Fetal Heart heart
45 chr10:97175000-97176400 Flanking Active TSS Adipose Nuclei Adipose
46 chr10:97175000-97176400 Flanking Active TSS Skeletal Muscle Male skeletal muscle
47 chr10:97175000-97189800 Weak transcription Rectal Mucosa Donor 29 rectum
48 chr10:97175200-97175800 Enhancers HUES6 Cell Line embryonic stem cell
49 chr10:97175200-97175800 Flanking Active TSS Brain Angular Gyrus brain
50 chr10:97175200-97175800 ZNF genes & repeats Pancreas Pancrea

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Last update: Aug 31, 2015