Variant report

Variant	rs61892664
Chromosome Location	chr11:51567338-51567339
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:13 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv897575	chr11:50730482-51579085	ZNF genes & repeats Weak transcription Active TSS Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
2	nsv554427	chr11:51095992-51580203	ZNF genes & repeats Weak transcription Bivalent Enhancer Bivalent/Poised TSS Enhancers Flanking Bivalent TSS/Enh Active TSS Genic enhancers Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
3	nsv897582	chr11:51127089-51579085	ZNF genes & repeats Enhancers Weak transcription Active TSS Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
4	nsv554434	chr11:51183814-51593877	ZNF genes & repeats Weak transcription Genic enhancers Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Bivalent/Poised TSS Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
5	nsv554440	chr11:51187354-51578097	ZNF genes & repeats Weak transcription Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Enhancers Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
6	nsv554587	chr11:51362490-51581931	Weak transcription ZNF genes & repeats Bivalent Enhancer Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases
7	nsv554588	chr11:51365437-51582380	ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Weak transcription Enhancers Bivalent/Poised TSS Active TSS Genic enhancers Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases
8	nsv554589	chr11:51365437-51593877	ZNF genes & repeats Weak transcription Flanking Bivalent TSS/Enh Enhancers Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases
9	nsv554591	chr11:51372036-51591253	ZNF genes & repeats Weak transcription Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Active TSS Flanking Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases
10	nsv975109	chr11:51484171-51594205	ZNF genes & repeats Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Active TSS Flanking Active TSS Enhancers Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
11	esv4734	chr11:51567297-51591315	ZNF genes & repeats Weak transcription Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS Bivalent Enhancer Genic enhancers Enhancers Flanking Active TSS	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	n/a
12	esv8155	chr11:51567298-51572171	ZNF genes & repeats Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	n/a
13	esv8625	chr11:51567302-51581127	ZNF genes & repeats Flanking Bivalent TSS/Enh Weak transcription Bivalent/Poised TSS Active TSS Bivalent Enhancer Enhancers Flanking Active TSS Genic enhancers	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:109 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:51567200-51567400	Bivalent Enhancer	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr11:51567200-51567400	Flanking Bivalent TSS/Enh	H9 Derived Neuron Cultured Cells	ES cell derived
3	chr11:51567200-51567400	ZNF genes & repeats	Primary T helper naive cells fromperipheralblood	blood
4	chr11:51567200-51567400	ZNF genes & repeats	Primary T cells effector/memory enriched fromperipheralblood	blood
5	chr11:51567200-51567400	ZNF genes & repeats	Primary T killer memory cells from peripheral blood	blood
6	chr11:51567200-51567400	ZNF genes & repeats	Aorta	Aorta
7	chr11:51567200-51567400	ZNF genes & repeats	Brain Cingulate Gyrus	brain
8	chr11:51567200-51567400	ZNF genes & repeats	Brain Inferior Temporal Lobe	brain
9	chr11:51567200-51567400	ZNF genes & repeats	Brain Substantia Nigra	brain
10	chr11:51567200-51567400	ZNF genes & repeats	Esophagus	oesophagus
11	chr11:51567200-51567400	ZNF genes & repeats	Fetal Kidney	kidney
12	chr11:51567200-51567400	ZNF genes & repeats	Placenta	Placenta
13	chr11:51567200-51567400	ZNF genes & repeats	Fetal Thymus	thymus
14	chr11:51567200-51567400	ZNF genes & repeats	Gastric	stomach
15	chr11:51567200-51567400	ZNF genes & repeats	Lung	lung
16	chr11:51567200-51567400	ZNF genes & repeats	Ovary	ovary
17	chr11:51567200-51567400	ZNF genes & repeats	Pancreas	Pancrea
18	chr11:51567200-51567400	Flanking Bivalent TSS/Enh	Right Atrium	heart
19	chr11:51567200-51567400	ZNF genes & repeats	Skeletal Muscle Male	skeletal muscle
20	chr11:51567200-51567400	ZNF genes & repeats	Thymus	Thymus
21	chr11:51567200-51567400	ZNF genes & repeats	Spleen	Spleen
22	chr11:51567200-51567400	ZNF genes & repeats	A549	lung
23	chr11:51567200-51567400	ZNF genes & repeats	GM12878-XiMat	blood
24	chr11:51567200-51567400	ZNF genes & repeats	HSMMtube	muscle
25	chr11:51567200-51567400	ZNF genes & repeats	K562	blood
26	chr11:51567200-51567400	ZNF genes & repeats	NHDF-Ad	bronchial
27	chr11:51567200-51567400	ZNF genes & repeats	NHEK	skin
28	chr11:51567200-51567400	ZNF genes & repeats	NHLF	lung
29	chr11:51567200-51567400	ZNF genes & repeats	Osteobl	bone
30	chr11:51567200-51567600	ZNF genes & repeats	H1 Derived Mesenchymal Stem Cells	ES cell derived
31	chr11:51567200-51567600	ZNF genes & repeats	iPS DF 6.9 Cell Line	embryonic stem cell
32	chr11:51567200-51567600	ZNF genes & repeats	iPS DF 19.11 Cell Line	embryonic stem cell
33	chr11:51567200-51567600	ZNF genes & repeats	Primary T helper naive cells from peripheral blood	blood
34	chr11:51567200-51567600	ZNF genes & repeats	Primary T helper memory cells from peripheral blood 1	blood
35	chr11:51567200-51567600	ZNF genes & repeats	Primary T helper 17 cells PMA-I stimulated	--
36	chr11:51567200-51567600	ZNF genes & repeats	Primary T helper cells fromperipheralblood	blood
37	chr11:51567200-51567600	ZNF genes & repeats	Primary T regulatory cells fromperipheralblood	blood
38	chr11:51567200-51567600	ZNF genes & repeats	Primary Natural Killer cells fromperipheralblood	blood
39	chr11:51567200-51567600	ZNF genes & repeats	Primary T killer naive cells fromperipheralblood	blood
40	chr11:51567200-51567600	ZNF genes & repeats	Muscle Satellite Cultured Cells	--
41	chr11:51567200-51567600	ZNF genes & repeats	Brain Anterior Caudate	brain
42	chr11:51567200-51567600	ZNF genes & repeats	Brain Hippocampus Middle	brain
43	chr11:51567200-51567600	ZNF genes & repeats	Brain Dorsolateral Prefrontal Cortex	brain
44	chr11:51567200-51567600	ZNF genes & repeats	Colonic Mucosa	Colon
45	chr11:51567200-51567600	ZNF genes & repeats	Colon Smooth Muscle	Colon
46	chr11:51567200-51567600	ZNF genes & repeats	Duodenum Mucosa	Duodenum
47	chr11:51567200-51567600	ZNF genes & repeats	Fetal Heart	heart
48	chr11:51567200-51567600	ZNF genes & repeats	Fetal Lung	lung
49	chr11:51567200-51567600	ZNF genes & repeats	Fetal Muscle Trunk	muscle
50	chr11:51567200-51567600	ZNF genes & repeats	Fetal Muscle Leg	muscle

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