Variant report

Variant	rs61893487
Chromosome Location	chr11:76342458-76342459
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:76340695..76342545-chr8:146016002..146018963,2	MCF-7	breast:
2	chr11:76338138..76339963-chr11:76341531..76343151,2	K562	blood:

Variant related genes	Relation type
ENSG00000161016	Chromatin interaction

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs7929765	0.94[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1043912	chr11:76301316-76439095	Enhancers Flanking Bivalent TSS/Enh Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Genic enhancers Strong transcription Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	14 gene(s)	inside rSNPs	diseases
2	nsv1039451	chr11:76301316-76440221	Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Enhancers Bivalent/Poised TSS Flanking Active TSS Strong transcription ZNF genes & repeats Genic enhancers Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	14 gene(s)	inside rSNPs	diseases
3	esv1810781	chr11:76311021-76464814	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription Active TSS ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	14 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:24 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:76337600-76342600	Enhancers	Primary monocytes fromperipheralblood	blood
2	chr11:76339400-76342600	Enhancers	Left Ventricle	heart
3	chr11:76339600-76342600	Enhancers	Fetal Adrenal Gland	Adrenal Gland
4	chr11:76339800-76342600	Enhancers	Fetal Stomach	stomach
5	chr11:76339800-76342800	Enhancers	Fetal Muscle Leg	muscle
6	chr11:76340000-76343800	Enhancers	HUVEC	blood vessel
7	chr11:76341400-76342600	Enhancers	Monocytes-CD14+_RO01746	blood
8	chr11:76341600-76342600	Enhancers	Skeletal Muscle Male	skeletal muscle
9	chr11:76341600-76346200	Weak transcription	Right Atrium	heart
10	chr11:76341600-76346400	Weak transcription	Lung	lung
11	chr11:76341600-76346400	Weak transcription	Right Ventricle	heart
12	chr11:76341600-76347200	Weak transcription	Skeletal Muscle Female	skeletal muscle
13	chr11:76341600-76353000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
14	chr11:76341800-76342800	Enhancers	Adipose Nuclei	Adipose
15	chr11:76341800-76346800	Weak transcription	Spleen	Spleen
16	chr11:76342000-76346000	Weak transcription	Fetal Muscle Trunk	muscle
17	chr11:76342000-76346200	Weak transcription	Colonic Mucosa	Colon
18	chr11:76342000-76346600	Weak transcription	Primary B cells from peripheral blood	blood
19	chr11:76342000-76347000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
20	chr11:76342000-76347400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
21	chr11:76342200-76346200	Weak transcription	Placenta	Placenta
22	chr11:76342200-76346800	Weak transcription	Primary B cells from cord blood	blood
23	chr11:76342400-76342800	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
24	chr11:76342400-76348400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived

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